RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 CSPG5O95196 566 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 PF4P02776 101 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 GJA9P57773 515 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 MECOMQ03112 1051 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 DMWDQ09019 674 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 SMAD4Q13485 552 aaKnown RBP6.85□□□□□ -1.31
ATXN3-226ENST00000554350 PDZD8Q8NEN9 1154 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 KLHDC4Q8TBB5 520 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 ACER1Q8TDN7 264 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 RAD9AQ99638 391 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 C17orf80Q9BSJ5 609 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 DHX36Q9H2U1 1008 aaKnown RBP6.85□□□□□ -1.31
ATXN3-226ENST00000554350 IFT57Q9NWB7 429 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 CD207Q9UJ71 328 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 ZNF281Q9Y2X9 895 aa6.85□□□□□ -1.31
ATXN3-226ENST00000554350 ZNFX1Q9P2E3 1918 aaKnown RBP6.85□□□□□ -1.31
ATXN3-226ENST00000554350 GPR179Q6PRD1 2367 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 A0A1B0GUL7 405 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 RBM47A0AV96 593 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 CHURC1-FNTBB4DL54 471 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 ADCY6O43306 1168 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 ZEB2O60315 1214 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 CABYRO75952 493 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 FLOT1O75955 427 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 BAIAP3O94812 1187 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 HLA-DOAP06340 250 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 LDHCP07864 332 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 TMEM253P0C7T8 217 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SUPT20HL2P0C7V6 817 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 ZNF853P0CG23 659 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 FGFR2P21802 821 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 RFC2P35250 354 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 PHKA1P46020 1223 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 WDR5P61964 334 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 GSTO1P78417 241 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 DEFB103AP81534 67 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 CALD1Q05682 793 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 PSMD2Q13200 908 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 ACVR2BQ13705 512 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 CCDC144BQ3MJ40 725 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 TTLL10Q6ZVT0 673 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 MAPKAPK5Q8IW41 473 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 MB21D1Q8N884 522 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SLC43A3Q8NBI5 491 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 BAHD1Q8TBE0 780 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 RUNDC1Q96C34 613 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SUCLG2Q96I99 432 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 RPGRIP1Q96KN7 1286 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 KIAA1683Q9H0B3 1180 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SIL1Q9H173 461 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 UPF3AQ9H1J1 476 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 DNAJC18Q9H819 358 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 TRMT13Q9NUP7 481 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SAP30BPQ9UHR5 308 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 DIS3Q9Y2L1 958 aaKnown RBP6.84□□□□□ -1.31
ATXN3-226ENST00000554350 SIP14410 1827 aa6.84□□□□□ -1.31
ATXN3-226ENST00000554350 NCK2O43639 380 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 SLC25A27O95847 323 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 EFEMP2O95967 443 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 LMNAP02545 664 aaKnown RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 GARTP22102 1010 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 NDUFV1P49821 464 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 TEKQ02763 1124 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 DLX2Q07687 328 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 GPM6BQ13491 265 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 NR0B2Q15466 257 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 ATP2B3Q16720 1220 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 FAM47CQ5HY64 1035 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 BEND3Q5T5X7 828 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 ATF7IPQ6VMQ6 1270 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 FOXP4Q8IVH2 680 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 TMEM105Q8N8V8 129 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 SH3RF3Q8TEJ3 882 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 RIPOR3Q96MK2 946 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 AP5M1Q9H0R1 490 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 ALDH8A1Q9H2A2 487 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 MFSD1Q9H3U5 465 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 BICC1Q9H694 974 aaKnown RBP6.83□□□□□ -1.32
ATXN3-226ENST00000554350 CABP5Q9NP86 173 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 DLL3Q9NYJ7 618 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 KCNH3Q9ULD8 1083 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 PALD1Q9ULE6 856 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 USP24Q9UPU5 2620 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 MYO15AQ9UKN7 3530 aa6.83□□□□□ -1.32
ATXN3-226ENST00000554350 CEP250Q9BV73 2442 aa6.82□□□□□ -1.32
ATXN3-226ENST00000554350 GRIN2DO15399 1336 aa6.82□□□□□ -1.32
ATXN3-226ENST00000554350 TNKSO95271 1327 aa6.82□□□□□ -1.32
ATXN3-226ENST00000554350 MYOCOSA0A1B0GUC4 107 aa6.82□□□□□ -1.32
ATXN3-226ENST00000554350 NOTOA8MTQ0 251 aa6.82□□□□□ -1.32
ATXN3-226ENST00000554350 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
ATXN3-226ENST00000554350 E9PSI1 815 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms