RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 B4GALT3O60512 393 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 RECKO95980 971 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF28P17035 718 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 RALBP1Q15311 655 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 DLGAP5Q15398 846 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 CCL15Q16663 113 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 LRRC24Q50LG9 513 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 BEND3Q5T5X7 828 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 GTF2IRD2BQ6EKJ0 949 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 APOBEC3HQ6NTF7 200 aaKnown RBP4.02□□□□□ -1.77
SLIRP-202ENST00000553981 POMZP3Q6PJE2 187 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 SPRED1Q7Z699 444 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 GTF2IRD2Q86UP8 949 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 METTL16Q86W50 562 aaKnown RBP4.02□□□□□ -1.77
SLIRP-202ENST00000553981 RIOX2Q8IUF8 465 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 TRIM59Q8IWR1 403 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 CRACR2BQ8N4Y2 399 aaPredicted RBP4.02□□□□□ -1.77
SLIRP-202ENST00000553981 FAM169BQ8N8A8 192 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 KLHDC4Q8TBB5 520 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 FRS2Q8WU20 508 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 ERO1AQ96HE7 468 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 SUCLG2Q96I99 432 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 SORCS2Q96PQ0 1159 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 APBA2Q99767 749 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 LGR4Q9BXB1 951 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 SCAND2PQ9GZW5 306 aaPredicted RBP4.02□□□□□ -1.77
SLIRP-202ENST00000553981 CYP26B1Q9NR63 512 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 PPP4R1LQ9P1A2 415 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 CPA4Q9UI42 421 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 MGAMO43451 1857 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 PLXNB2O15031 1838 aa4.02□□□□□ -1.77
SLIRP-202ENST00000553981 FAM205AQ6ZU69 1335 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 MYO3BQ8WXR4 1341 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 SCAMP3O14828 347 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 LAMTOR5O43504 91 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 PLIN1O60240 522 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 TLR2O60603 784 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 C6P13671 934 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 NASPP49321 788 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF143P52747 638 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 RPL11P62913 178 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 FKBP1AP62942 108 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 LACTBP83111 547 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 LMOD3Q0VAK6 560 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 RRP1BQ14684 758 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 ICAM4Q14773 271 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 CDSNQ15517 529 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 MROH9Q5TGP6 573 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 LMBR1LQ6UX01 489 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 CEP68Q76N32 757 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 Q7L0L9 218 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 MIGA2Q7L4E1 593 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 ANKRD13AQ8IZ07 590 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 Q8N1X5 172 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 Q8N1Y9 231 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 VGLL2Q8N8G2 317 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 NPLOC4Q8TAT6 608 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 SH3RF3Q8TEJ3 882 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 DIS3LQ8TF46 1054 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 GCC1Q96CN9 775 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 MRGPRX3Q96LB0 322 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 CDC5LQ99459 802 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 NKX2-4Q9H2Z4 354 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 PRKRIP1Q9H875 184 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 NGRNQ9NPE2 291 aaKnown RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 TMEFF2Q9UIK5 374 aaPredicted RBP4.01□□□□□ -1.77
SLIRP-202ENST00000553981 TSC22D4Q9Y3Q8 395 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 RIPOR2Q9Y4F9 1068 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 X6R8D5 127 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 PTPRFP10586 1907 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 ATRNL1Q5VV63 1379 aa4.01□□□□□ -1.77
SLIRP-202ENST00000553981 ARNTLO00327 626 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 NOP56O00567 594 aaKnown RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 NBPF7P0C2Y1 421 aaPredicted RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 TACR2P21452 398 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 FGFR2P21802 821 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 NF2P35240 595 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 IGHMBP2P38935 993 aaKnown RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 BCL6P41182 706 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 GJA8P48165 433 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 INHBEP58166 350 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 GNAI1P63096 354 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 NKX3-2P78367 333 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 PRKCZQ05513 592 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 SURF1Q15526 300 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 TWISTNBQ3B726 338 aaPredicted RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 SLC9C1Q4G0N8 1177 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 MFSD14BQ5SR56 506 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 CCDC30Q5VVM6 783 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 IQCEQ6IPM2 695 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 CCDC103Q8IW40 242 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 ANKRD44Q8N8A2 993 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 GOLGA6L2Q8N9W4 650 aaPredicted RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 ZNF384Q8TF68 577 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 DNAAF4Q8WXU2 420 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 KISS1RQ969F8 398 aaPredicted RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 MBD6Q96DN6 1003 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 TRMT2BQ96GJ1 504 aaKnown RBP4□□□□□ -1.77
SLIRP-202ENST00000553981 ZSWIM3Q96MP5 696 aa4□□□□□ -1.77
SLIRP-202ENST00000553981 PNNQ9H307 717 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms