RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ERP44Q9BS26 406 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 CNOT8Q9UFF9 292 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 ATP9AO75110 1047 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 COMTP21964 271 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 GPC5P78333 572 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 NBPF9Q3BBW0 867 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 JAMLQ86YT9 394 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 FAM84AQ96KN4 292 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 GMLQ99445 158 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 ASTN2O75129 1339 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-211ENST00000553882 ASNSP08243 561 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 MMEP08473 750 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 SOX10P56693 466 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 ZDHHC14Q8IZN3 488 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 FBXO25Q8TCJ0 367 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 SEMA4DQ92854 862 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
ACTN1-211ENST00000553882 TCEAL9Q9UHQ7 104 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 SLC12A6Q9UHW9 1150 aa15.7■□□□□ 0.1
ACTN1-211ENST00000553882 TCRBV7S2A1N4TA0A589 114 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 SMIM23A6NLE4 172 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 PLA2G6O60733 806 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 SHBGP04278 402 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 DUPD1Q68J44 220 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 ARFGAP2Q8N6H7 521 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 UBL4BQ8N7F7 174 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 DIS3Q9Y2L1 958 aaKnown RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 TESPA1A2RU30 521 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 ANKRD63C9JTQ0 380 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 CALCAP01258 141 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 CHRNB2P17787 502 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 ADSSP30520 456 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 RPS6P62753 249 aaKnown RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 BIRC3Q13489 604 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 MYBPC2Q14324 1141 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 SNRNP35Q16560 246 aaKnown RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 XKR9Q5GH70 373 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 NSMFQ6X4W1 530 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 SYTL5Q8TDW5 730 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-211ENST00000553882 KAT2BQ92831 832 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 ZSWIM1Q9BR11 485 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 ZDHHC18Q9NUE0 388 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 PTPN22Q9Y2R2 807 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 SYNGAP1Q96PV0 1343 aa15.69■□□□□ 0.1
ACTN1-211ENST00000553882 KIAA0754O94854 1291 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 GTF2BQ00403 316 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
ACTN1-211ENST00000553882 PRELID2Q8N945 189 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 UHMK1Q8TAS1 419 aaKnown RBP15.68■□□□□ 0.1
ACTN1-211ENST00000553882 NOCTQ9UK39 431 aaKnown RBP15.68■□□□□ 0.1
ACTN1-211ENST00000553882 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
ACTN1-211ENST00000553882 UBIAD1Q9Y5Z9 338 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 RTN2O75298 545 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 PPFIA2O75334 1257 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 FAM107AO95990 144 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 PYGMP11217 842 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 PPP2R2AP63151 447 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 RASA3Q14644 834 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 FBXW10Q5XX13 1052 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 PCNX4Q63HM2 1172 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 OTUD6BQ8N6M0 293 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
ACTN1-211ENST00000553882 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 COL4A5P29400 1685 aa15.68■□□□□ 0.1
ACTN1-211ENST00000553882 KIAA0391O15091 583 aaKnown RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 SPOPO43791 374 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 CAND2O75155 1236 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 CCNE2O96020 404 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 ALCAMQ13740 583 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 C11orf63Q6NUN7 778 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 FAM71AQ8IYT1 594 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 MDM1Q8TC05 714 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 NUP85Q9BW27 656 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 PCNTO95613 3336 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 MEFVO15553 781 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 PHF2O75151 1096 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 DLATP10515 647 aaKnown RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 CNGA1P29973 690 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 RPL21P46778 160 aaKnown RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 FMO1Q01740 532 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 IFT88Q13099 833 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 ZDHHC24Q6UX98 284 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 ZNF564Q8TBZ8 553 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-211ENST00000553882 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 CYFIP2Q96F07 1278 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 EPB41L4BQ9H329 900 aa15.67■□□□□ 0.1
ACTN1-211ENST00000553882 MIF4GDA9UHW6 222 aaKnown RBP15.66■□□□□ 0.1
ACTN1-211ENST00000553882 WNT10BO00744 389 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms