RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 STAT5BP51692 787 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 PRKCEQ02156 737 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 PTPN21Q16825 1174 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 RINT1Q6NUQ1 792 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 ADGRD2Q7Z7M1 963 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 CCDC60Q8IWA6 550 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-208ENST00000553868 GPR20Q99678 358 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 BCAS3Q9H6U6 928 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 NRBP2Q9NSY0 501 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-208ENST00000553868 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 EMSYQ7Z589 1322 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 LOXHD1Q8IVV2 1947 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 A0A087WWV3 80 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-208ENST00000553868 PSMA7O14818 248 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 FAM13AO94988 1023 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 OATP04181 439 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 MMP3P08254 477 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 BMP6P22004 513 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 NUBP1P53384 320 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 MYL5Q02045 173 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 ARHGAP1Q07960 439 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 COASYQ13057 564 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 CAMK1Q14012 370 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 GIT2Q14161 759 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 HIC1Q14526 733 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 COBLL1Q53SF7 1204 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 XKR9Q5GH70 373 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 PADI6Q6TGC4 694 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 PLPPR4Q7Z2D5 763 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 PPTC7Q8NI37 304 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 GLG1Q92896 1179 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 REEP2Q9BRK0 252 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 RUSC1Q9BVN2 902 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 PHF7Q9BWX1 381 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-208ENST00000553868 IFIH1Q9BYX4 1025 aaKnown RBP15.94■□□□□ 0.14
SHMT2-208ENST00000553868 ZHX3Q9H4I2 956 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 SMARCAD1Q9H4L7 1026 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 SEL1LQ9UBV2 794 aa15.94■□□□□ 0.14
SHMT2-208ENST00000553868 SPTBN2O15020 2390 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 CEP250Q9BV73 2442 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 FRMD3A2A2Y4 597 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 C5orf67F2Z3F1 127 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 BMPR1AP36894 532 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 PTK7Q13308 1070 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 IQCB1Q15051 598 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 PLEKHG4Q58EX7 1191 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 FAM26FQ5R3K3 315 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 LUZP1Q86V48 1076 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 EXOC8Q8IYI6 725 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 FIBCD1Q8N539 461 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 AOPEPQ8N6M6 819 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 C7orf31Q8N865 590 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 DHTKD1Q96HY7 919 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-208ENST00000553868 CEP170P1Q96L14 293 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 LMAN2LQ9H0V9 348 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 SEPT9Q9UHD8 586 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-208ENST00000553868 CHD6Q8TD26 2715 aa15.93■□□□□ 0.14
SHMT2-208ENST00000553868 ZBTB39O15060 712 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 ZNF862O60290 1169 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 GLP2RO95838 553 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 SP100P23497 879 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 DNAJB1P25685 340 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 RBM10P98175 930 aaKnown RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 EHHADHQ08426 723 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 PAK1Q13153 545 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 HSDL1Q3SXM5 330 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 UTP14CQ5TAP6 766 aaKnown RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 ANO5Q75V66 913 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 KIAA2013Q8IYS2 634 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 MCPH1Q8NEM0 835 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 ENOX1Q8TC92 643 aaKnown RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 C11orf84Q9BUA3 381 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 SMOC2Q9H3U7 446 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 PARVGQ9HBI0 331 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 GDAQ9Y2T3 454 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 FRYLO94915 3013 aa15.92■□□□□ 0.14
SHMT2-208ENST00000553868 MAP1BP46821 2468 aaKnown RBP15.92■□□□□ 0.14
SHMT2-208ENST00000553868 NPHP3-ACAD11A0A0J9YXS1 232 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 BICDL2A1A5D9 508 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RSPH10B2B2RC85 870 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 PPP1R3GB7ZBB8 358 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 USO1O60763 962 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 PPFIA4O75335 1185 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 DGAT1O75907 488 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RSPH10BP0C881 870 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 THPOP40225 353 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RFC5P40937 340 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 PRCPP42785 496 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RAD51AP2Q09MP3 1159 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 KLHL10Q6JEL2 608 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
SHMT2-208ENST00000553868 RBM23Q86U06 439 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 GUF1Q8N442 669 aaKnown RBP15.91■□□□□ 0.14
SHMT2-208ENST00000553868 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms