RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 CLP1Q92989 425 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 TGS1Q96RS0 853 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 CEP89Q96ST8 783 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 POLR3FQ9H1D9 316 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 C2orf40Q9H1Z8 148 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 BHMT2Q9H2M3 363 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 PIN4Q9Y237 131 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 ATP6V1DQ9Y5K8 247 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 TRIP12Q14669 1992 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 A0A087WWV3 80 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 PP2D1A8MPX8 630 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 KRT18P05783 430 aaKnown RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 MYOGP15173 224 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 CYP11B2P19099 503 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 IGFBP4P22692 258 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 AXLP30530 894 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 RAB27AP51159 221 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 DRP2Q13474 957 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TCTN1Q2MV58 587 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 PTCRAQ6ISU1 281 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TMCO2Q7Z6W1 182 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 RNF169Q8NCN4 708 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 SLC17A8Q8NDX2 589 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TMEM40Q8WWA1 233 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 PGBD4Q96DM1 585 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 DRC1Q96MC2 740 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 CDX2Q99626 313 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TIPINQ9BVW5 301 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 OSBPL7Q9BZF2 842 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-209ENST00000553855 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
PSEN1-209ENST00000553855 E9PMD0 336 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 EOMESO95936 686 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 F13A1P00488 732 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 FGFR4P22455 802 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 CDC25AP30304 524 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 ARL2P36404 184 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 NAMPTP43490 491 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 SMTNP53814 917 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 HTRA4P83105 476 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-209ENST00000553855 GRIN2CQ14957 1233 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 CNNM3Q8NE01 707 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 RSPH1Q8WYR4 309 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 CCDC51Q96ER9 411 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 PLIN2Q99541 437 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 TTYH1Q9H313 450 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-209ENST00000553855 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 ELAC1Q9H777 363 aaKnown RBP9.21□□□□□ -0.94
PSEN1-209ENST00000553855 CERS4Q9HA82 394 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 XPNPEP1Q9NQW7 623 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 KCND2Q9NZV8 630 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 MTUS1Q9ULD2 1270 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 STXBP5LQ9Y2K9 1186 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
PSEN1-209ENST00000553855 ADGRA3Q8IWK6 1321 aa9.21□□□□□ -0.94
PSEN1-209ENST00000553855 A0A0U1RQF3 1178 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 LINC01553A4QN01 128 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CCDC169A6NNP5 214 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 TBKBP1A7MCY6 615 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 C9IYK1 514 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 H0YCG3 227 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 SPTLC2O15270 562 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CSDE1O75534 798 aaKnown RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 DGKIO75912 1065 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 YEATS4O95619 227 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PLA2G4BP0C869 781 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 LIG1P18858 919 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 NCLP19338 710 aaKnown RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 GLRA2P23416 452 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CTNNB1P35222 781 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 EFNA5P52803 228 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PTENP60484 403 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 ERVK-21P61565 698 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 TAP1Q03518 808 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 DPYDQ12882 1025 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 DMP1Q13316 513 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CAPSQ13938 189 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 SLC39A14Q15043 492 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 IL17AQ16552 155 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 MAPK6Q16659 721 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PTPROQ16827 1216 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 SWI5Q1ZZU3 235 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms