RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MCM6Q14566 821 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 STK38Q15208 465 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 TCEAL5Q5H9L2 206 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 GPBP1Q86WP2 473 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 TRIM6Q9C030 488 aaPredicted RBP22.46■■□□□ 1.19
FOXA1-203ENST00000553751 TFIP11Q9UBB9 837 aaKnown RBP22.46■■□□□ 1.19
FOXA1-203ENST00000553751 PHLPP2Q6ZVD8 1323 aa22.46■■□□□ 1.19
FOXA1-203ENST00000553751 SFI1A8K8P3 1242 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 INPPL1O15357 1258 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 B4GALT3O60512 393 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 PLS3P13797 630 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 PPM1AP35813 382 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 UBE3AQ05086 875 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 TAS1R3Q7RTX0 852 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 URGCPQ8TCY9 931 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 LARP4BQ92615 738 aaKnown RBP22.45■■□□□ 1.18
FOXA1-203ENST00000553751 UBN1Q9NPG3 1134 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 KMT5AQ9NQR1 393 aa22.45■■□□□ 1.18
FOXA1-203ENST00000553751 N4BP3O15049 544 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 SPTLC2O15270 562 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 ZC3H11AO75152 810 aaKnown RBP eCLIP22.44■■□□□ 1.18
FOXA1-203ENST00000553751 YEATS4O95619 227 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 VCANP13611 3396 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 IRS1P35568 1242 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 MLH1P40692 756 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 BCAR1P56945 870 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 PLCB3Q01970 1234 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 DHX8Q14562 1220 aaKnown RBP22.44■■□□□ 1.18
FOXA1-203ENST00000553751 NT5DC1Q5TFE4 455 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 SLC39A11Q8N1S5 342 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 SPIRE2Q8WWL2 714 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 ATXN2LQ8WWM7 1075 aaKnown RBP22.44■■□□□ 1.18
FOXA1-203ENST00000553751 REEP2Q9BRK0 252 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 NTPCRQ9BSD7 190 aaKnown RBP22.44■■□□□ 1.18
FOXA1-203ENST00000553751 APOL6Q9BWW8 343 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 NRDE2Q9H7Z3 1164 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 CCDC39Q9UFE4 941 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 ODF2LQ9ULJ1 636 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 COG5Q9UP83 839 aa22.44■■□□□ 1.18
FOXA1-203ENST00000553751 MYH11P35749 1972 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 ARL5CA6NH57 179 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 K7ERI5 159 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 SLC16A4O15374 487 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 PPP6R2O75170 966 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 TXLNAP40222 546 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 TFF2Q03403 129 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 RNASELQ05823 741 aaKnown RBP22.43■■□□□ 1.18
FOXA1-203ENST00000553751 TMEM132AQ24JP5 1023 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 FOXD4L6Q3SYB3 417 aaPredicted RBP22.43■■□□□ 1.18
FOXA1-203ENST00000553751 EEF1DP3Q658K8 133 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 FOXD4L3Q6VB84 417 aaPredicted RBP22.43■■□□□ 1.18
FOXA1-203ENST00000553751 ZNF280BQ86YH2 543 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 HACE1Q8IYU2 909 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 HLA-CQ95604 372 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 ZFP42Q96MM3 310 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 TMEM134Q9H6X4 195 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 SPG21Q9NZD8 308 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 DNAJB4Q9UDY4 337 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 STK17AQ9UEE5 414 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 LZTS1Q9Y250 596 aa22.43■■□□□ 1.18
FOXA1-203ENST00000553751 RBM19Q9Y4C8 960 aaKnown RBP22.43■■□□□ 1.18
FOXA1-203ENST00000553751 ZMYM2Q9UBW7 1377 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 POMCP01189 267 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 AKAP5P24588 427 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 DDIT3P35638 169 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
FOXA1-203ENST00000553751 COL19A1Q14993 1142 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 ATF7IP2Q5U623 682 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 TMEM173Q86WV6 379 aaPredicted RBP22.42■■□□□ 1.18
FOXA1-203ENST00000553751 MRPS27Q92552 414 aaKnown RBP22.42■■□□□ 1.18
FOXA1-203ENST00000553751 GAD1Q99259 594 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 GBP3Q9H0R5 595 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 TLR9Q9NR96 1032 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 KANSL3Q9P2N6 904 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 GIT1Q9Y2X7 761 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 PCDHGC5Q9Y5F6 944 aa22.42■■□□□ 1.18
FOXA1-203ENST00000553751 A0A087X0B3 334 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 NT5C1B-RDH14C9J2C7 533 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 FSCN2O14926 492 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 DDHD2O94830 711 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 ZNF131P52739 623 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 ERVFC1P60507 584 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 GIT2Q14161 759 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 TMEM161BQ8NDZ6 487 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 ADPGKQ9BRR6 497 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 UBE2ZQ9H832 354 aaPredicted RBP22.41■■□□□ 1.18
FOXA1-203ENST00000553751 KCNG1Q9UIX4 513 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 TNFSF13BQ9Y275 285 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 ZDHHC9Q9Y397 364 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 CUL9Q8IWT3 2517 aa22.41■■□□□ 1.18
FOXA1-203ENST00000553751 BRD1O95696 1058 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 GALTP07902 379 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 MAPTP10636 758 aaKnown RBP22.4■■□□□ 1.18
FOXA1-203ENST00000553751 SLC11A1P49279 550 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 SCNN1GP51170 649 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 SMTNP53814 917 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 NCKAP1LP55160 1127 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 MRPS5P82675 430 aaKnown RBP22.4■■□□□ 1.18
FOXA1-203ENST00000553751 HYAL1Q12794 435 aa22.4■■□□□ 1.18
FOXA1-203ENST00000553751 DCAF4L1Q3SXM0 396 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms