RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 NSMFQ6X4W1 530 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 STXBP4Q6ZWJ1 553 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 LDHDQ86WU2 507 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SPATS2Q86XZ4 545 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 RHOT2Q8IXI1 618 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 NEK9Q8TD19 979 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 EPS8L3Q8TE67 593 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SEMA4DQ92854 862 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 CD101Q93033 1021 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TATDN2Q93075 761 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SEC16BQ96JE7 1060 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 KIFC3Q9BVG8 833 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TMEM117Q9H0C3 514 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TMX4Q9H1E5 349 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SEMA4AQ9H3S1 761 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 AZI2Q9H6S1 392 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TOPORSQ9NS56 1045 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 HSPBP1Q9NZL4 362 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 ZHX2Q9Y6X8 837 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SYNGAP1Q96PV0 1343 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 DOCK5Q9H7D0 1870 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 FAM187AA6NFU0 413 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 H0YHG0 523 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 CYP26A1O43174 497 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 NUDT17P0C025 328 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 ALAS1P13196 640 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 CTNNA2P26232 953 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 KCNJ1P48048 391 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 RARRES1P49788 294 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 GTF2A1P52655 376 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SETQ01105 290 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 FMO1Q01740 532 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 MAP2K1Q02750 393 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 DHX34Q14147 1143 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SLC29A2Q14542 456 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 MICALCLQ6ZW33 695 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 MIER3Q7Z3K6 550 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 CBWD2Q8IUF1 395 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 PLCD3Q8N3E9 789 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 ATXN2LQ8WWM7 1075 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SAAL1Q96ER3 474 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 XPO6Q96QU8 1125 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 JPH2Q9BR39 696 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 MXRA8Q9BRK3 442 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 FAM129AQ9BZQ8 928 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 PABPC3Q9H361 631 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 KCND2Q9NZV8 630 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TRPC5Q9UL62 973 aaPredicted RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 SCAF8Q9UPN6 1271 aaKnown RBP7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 TRPC6Q9Y210 931 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
LINC-ROR-201ENST00000553704 ZNF536O15090 1300 aa7.46□□□□□ -1.21
LINC-ROR-201ENST00000553704 TLDC2A0PJX2 215 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLC16A4O15374 487 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ATP2C2O75185 946 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHN1P15882 459 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 RFX1P22670 979 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLCO1A2P46721 670 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 MXI1P50539 228 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ANKRD20A8PQ5CZ79 823 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 DENND2CQ68D51 928 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 PLA2G4FQ68DD2 849 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC137Q6PK04 289 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 INTS8Q75QN2 995 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 MIGA2Q7L4E1 593 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SELENOSQ9BQE4 189 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 HERPUD2Q9BSE4 406 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 DIS3Q9Y2L1 958 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 MRPL11Q9Y3B7 192 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SPDYE2BA6NHP3 402 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 TP73O15350 636 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC172P0C7W6 258 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SPDYE6P0CI01 402 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 DLATP10515 647 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 BCRP11274 1271 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 MUTP22033 750 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ADSSP30520 456 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CHRNA3P32297 505 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 GPC5P78333 572 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CCDC38Q502W7 563 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ERMARDQ5T6L9 678 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 LLGL2Q6P1M3 1020 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 KRT27Q7Z3Y8 459 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 FAM71AQ8IYT1 594 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 PPM1KQ8N3J5 372 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 XXYLT1Q8NBI6 393 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 ZNF564Q8TBZ8 553 aaPredicted RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 NAP1L3Q99457 506 aaPredicted RBP7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 NUP85Q9BW27 656 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 TRIM7Q9C029 511 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 TMEM39BQ9GZU3 492 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 CD248Q9HCU0 757 aa7.46□□□□□ -1.22
LINC-ROR-201ENST00000553704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms