RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 DOK3Q7L591 496 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 SYNE4Q8N205 404 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 ZNF276Q8N554 614 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 CHFRQ96EP1 664 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 FAM193BQ96PV7 902 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-210ENST00000553693 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 TRPS1Q9UHF7 1281 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 TMPRSS11EQ9UL52 423 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 CLCA2Q9UQC9 943 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 TMA7Q9Y2S6 64 aaKnown RBP5.66□□□□□ -1.5
SCFD1-210ENST00000553693 CDY2AQ9Y6F7 541 aa5.66□□□□□ -1.5
SCFD1-210ENST00000553693 DNAJC6O75061 913 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 FAM20BO75063 409 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 CLEC2LP0C7M8 214 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 HK1P19367 917 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 SOX5P35711 763 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 HDGFL2Q7Z4V5 671 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-210ENST00000553693 RNF180Q86T96 592 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 THNSL2Q86YJ6 484 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 MSL3Q8N5Y2 521 aaKnown RBP5.65□□□□□ -1.5
SCFD1-210ENST00000553693 OR52N2Q8NGI0 321 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 LARP4BQ92615 738 aaKnown RBP5.65□□□□□ -1.5
SCFD1-210ENST00000553693 ACAP3Q96P50 834 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 KCTD10Q9H3F6 313 aa5.65□□□□□ -1.5
SCFD1-210ENST00000553693 EVLQ9UI08 416 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-210ENST00000553693 HSP90B1P14625 803 aaKnown RBP5.64□□□□□ -1.51
SCFD1-210ENST00000553693 HSD3B2P26439 372 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 TRIM25Q14258 630 aaKnown RBP5.64□□□□□ -1.51
SCFD1-210ENST00000553693 UBE3CQ15386 1083 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 C19orf54Q5BKX5 351 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 PITRM1Q5JRX3 1037 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 IQSEC1Q6DN90 963 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 MRGPRGQ86SM5 289 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 LDLRAD3Q86YD5 345 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 LYSMD2Q8IV50 215 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 SLC41A1Q8IVJ1 513 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 CPT1CQ8TCG5 803 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 HAS1Q92839 578 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 LENG9Q96B70 501 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 CEP89Q96ST8 783 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 CDC5LQ99459 802 aaKnown RBP5.64□□□□□ -1.51
SCFD1-210ENST00000553693 CAAP1Q9H8G2 361 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 GPRC5BQ9NZH0 403 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 EIF2B4Q9UI10 523 aaKnown RBP5.64□□□□□ -1.51
SCFD1-210ENST00000553693 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
SCFD1-210ENST00000553693 A0A087X1B8 175 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 TMEM191CA6NGB0 347 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 GRXCR1A8MXD5 290 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 PRR5-ARHGAP8B1AHC4 643 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 B5MCH6 92 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 NEMP1O14524 444 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 TMEM127O75204 238 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 RPS6KA4O75676 772 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 LGALS4P56470 323 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 STRN3Q13033 797 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 VPS72Q15906 364 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 FSCN1Q16658 493 aaKnown RBP5.63□□□□□ -1.51
SCFD1-210ENST00000553693 UGT8Q16880 541 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-210ENST00000553693 PDZD4Q76G19 769 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-210ENST00000553693 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
SCFD1-210ENST00000553693 CPEB1Q9BZB8 566 aaKnown RBP5.63□□□□□ -1.51
SCFD1-210ENST00000553693 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCFD1-210ENST00000553693 TLDC2A0PJX2 215 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 BRINP1O60477 761 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 SCAF4O95104 1147 aaKnown RBP5.62□□□□□ -1.51
SCFD1-210ENST00000553693 CFBP00751 764 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 GASTP01350 101 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 ENPP1P22413 925 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 INHBEP58166 350 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCFD1-210ENST00000553693 CT83Q5H943 113 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 CT47A1Q5JQC4 288 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-210ENST00000553693 LRRC55Q6ZSA7 311 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 ULK2Q8IYT8 1036 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 CHAC2Q8WUX2 184 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 ZNF480Q8WV37 535 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 SNX33Q8WV41 574 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 NDC1Q9BTX1 674 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 IKZF4Q9H2S9 585 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-210ENST00000553693 TNFRSF18Q9Y5U5 241 aa5.62□□□□□ -1.51
SCFD1-210ENST00000553693 RAMP2O60895 175 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 PHF2O75151 1096 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 ABHD16AO95870 558 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 ITGB1P05556 798 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 LPLP06858 475 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 LY6G5CQ5SRR4 150 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 SDE2Q6IQ49 451 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 MRGPREQ86SM8 312 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 DCLRE1CQ96SD1 692 aaKnown RBP5.61□□□□□ -1.51
SCFD1-210ENST00000553693 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
SCFD1-210ENST00000553693 SLC46A2Q9BY10 475 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 KCNH6Q9H252 994 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 PRDM12Q9H4Q4 367 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 FZD1Q9UP38 647 aa5.61□□□□□ -1.51
SCFD1-210ENST00000553693 ITGA10O75578 1167 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms