RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 RIN2Q8WYP3 895 aaPredicted RBP6.5□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MPHOSPH6Q99547 160 aaKnown RBP6.5□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RANBP17Q9H2T7 1088 aaKnown RBP6.5□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CHMP4BQ9H444 224 aaKnown RBP6.5□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RC3H2Q9HBD1 1191 aaKnown RBP6.5□□□□□ -1.37
SMARCE1P3-201ENST00000553649 LOC102724159A0A0B4J2E5 919 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SORBS3O60504 671 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 KPNA6O60684 536 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PLA2G6O60733 806 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ARIH2O95376 493 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 AMHP03971 560 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 C1QTNF9P0C862 333 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SP9P0CG40 484 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CKBP12277 381 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SP100P23497 879 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DNAJB1P25685 340 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CTNNB1P35222 781 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 BMPR1AP36894 532 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RPS6P62753 249 aaKnown RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PWP2Q15269 919 aaKnown RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 OCLNQ16625 522 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 LY6KQ17RY6 165 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 C7orf31Q8N865 590 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 VN1R2Q8NFZ6 395 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 OTUD7AQ8TE49 926 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CLEC4DQ8WXI8 215 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CLP1Q92989 425 aaKnown RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TOP1MTQ969P6 601 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 YME1L1Q96TA2 773 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TMEM47Q9BQJ4 181 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ALG1Q9BT22 464 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 C11orf84Q9BUA3 381 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RBSNQ9H1K0 784 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PARD6AQ9NPB6 346 aa6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TRIP12Q14669 1992 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ATG2AQ2TAZ0 1938 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SRRM3A6NNA2 597 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 B4DLN1 442 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SLC30A4O14863 429 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 FSCN2O14926 492 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 GH1P01241 217 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ASGR2P07307 311 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MMP3P08254 477 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ZNF286BP0CG31 522 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 GOLGA8HP0CJ92 632 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TOP1P11387 765 aaKnown RBP6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 EPHA1P21709 976 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PREPP48147 710 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 NRIP1P48552 1158 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MRPL12P52815 198 aaKnown RBP6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 HAND2P61296 217 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DUOXA2Q1HG44 320 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MSMPQ1L6U9 139 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 FAM26DQ5JW98 314 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 VPS53Q5VIR6 699 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ZC3H14Q6PJT7 736 aaKnown RBP6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 SHISA5Q8N114 240 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 POU5F2Q8N7G0 328 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ATP8B4Q8TF62 1192 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 KLHDC7BQ96G42 594 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RTP3Q9BQQ7 232 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 S1PR5Q9H228 398 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CPVLQ9H3G5 476 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 NCDNQ9UBB6 729 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 HDAC6Q9UBN7 1215 aa6.48□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MICAL3Q7RTP6 2002 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 LCTP09848 1927 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 C2CD4DB7Z1M9 353 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 FOXP2O15409 715 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DHX16O60231 1041 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PDHBP11177 359 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CASTP20810 708 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CDK11BP21127 795 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 EDNRBP24530 442 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 CDC27P30260 824 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 THPOP40225 353 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 RBM25P49756 843 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 MFAP1P55081 439 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ARHGAP1Q07960 439 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DGKDQ16760 1214 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PLEKHG4Q58EX7 1191 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 ZNF618Q5T7W0 954 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 N4BP2L1Q5TBK1 243 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 BTNL9Q6UXG8 535 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 UNQ6494/PRO21346Q6UXR6 183 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 PRR23BQ6ZRT6 265 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DHX37Q8IY37 1157 aaKnown RBP6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 DBF4BQ8NFT6 615 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 OR13H1Q8NG92 308 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 TBC1D5Q92609 795 aa6.47□□□□□ -1.37
SMARCE1P3-201ENST00000553649 KAT2BQ92831 832 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms