RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MRGPRX4Q96LA9 322 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 SAMD11Q96NU1 681 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 NT5C1BQ96P26 610 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 TMEM209Q96SK2 561 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 HERPUD2Q9BSE4 406 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 OSBPL6Q9BZF3 934 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 SLC6A17Q9H1V8 727 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 GNL3LQ9NVN8 582 aaKnown RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
TDP1-207ENST00000553617 ARHGAP20Q9P2F6 1191 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 SIK3Q9Y2K2 1263 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 PCDHA13Q9Y5I0 950 aa4.79□□□□□ -1.64
TDP1-207ENST00000553617 IRS2Q9Y4H2 1338 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 CFAP69A5D8W1 941 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 LRRC14BA6NHZ5 514 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 N4BP3O15049 544 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 PAPLNO95428 1278 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 CTSSP25774 331 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 HALP42357 657 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 ZNF200P98182 395 aaPredicted RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 CDC42EP1Q00587 391 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 BTKQ06187 659 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 ADAM9Q13443 819 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 RTP5Q14D33 572 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 NOMO1Q15155 1222 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 TUBB8Q3ZCM7 444 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 DGKKQ5KSL6 1271 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 CD300LDQ6UXZ3 194 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 DRC7Q8IY82 874 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 NKAPQ8N5F7 415 aaKnown RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 POF1BQ8WVV4 589 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 NKD2Q969F2 451 aaPredicted RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 DYDC2Q96IM9 177 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 C7orf25Q9BPX7 421 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 TACO1Q9BSH4 297 aaKnown RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 WDR12Q9GZL7 423 aaKnown RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 ZMAT3Q9HA38 289 aaKnown RBP4.78□□□□□ -1.64
TDP1-207ENST00000553617 ZFP69BQ9UJL9 534 aa4.78□□□□□ -1.64
TDP1-207ENST00000553617 RPTORQ8N122 1335 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 RHPN2P1A8MT19 583 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 F5H423 210 aaPredicted RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 TBX3O15119 743 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 NBNO60934 754 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 ENDOD1O94919 500 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 LY86O95711 162 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 RPLP2P05387 115 aaKnown RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 LTA4HP09960 611 aaKnown RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 RPL17P18621 184 aaKnown RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 AFMP43652 599 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 CD69Q07108 199 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 TARDBPQ13148 414 aaKnown RBP eCLIP4.77□□□□□ -1.65
TDP1-207ENST00000553617 RALBP1Q15311 655 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 FYB2Q5VWT5 728 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 MCTP1Q6DN14 999 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 GRAMD4Q6IC98 578 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 DPP8Q6V1X1 898 aaPredicted RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 Q6ZVL8 140 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 GPR155Q7Z3F1 870 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 TMC6Q7Z403 805 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 SAPCD2Q86UD0 394 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 IRF2BP1Q8IU81 584 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 TP53INP2Q8IXH6 220 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 ANKRD42Q8N9B4 389 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 C3orf20Q8ND61 904 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 IL31RAQ8NI17 732 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 PNISRQ8TF01 805 aaKnown RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 DDX11Q96FC9 970 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 KIRREL1Q96J84 757 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 ZC3H10Q96K80 434 aaKnown RBP4.77□□□□□ -1.65
TDP1-207ENST00000553617 FAM167AQ96KS9 214 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 LRRC27Q9C0I9 530 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 LUZP4Q9P127 313 aa4.77□□□□□ -1.65
TDP1-207ENST00000553617 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 MYO1FO00160 1098 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PHGDHO43175 533 aaKnown RBP4.76□□□□□ -1.65
TDP1-207ENST00000553617 SH3BP5O60239 455 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PHF2O75151 1096 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 WNT11O96014 354 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 NCAM1P13591 858 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 TYRP14679 529 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 TNFSF4P23510 183 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 VIPR1P32241 457 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 MC3RP41968 323 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 GLRBP48167 497 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 ITGA1P56199 1179 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 POU5F1BQ06416 359 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 FGL2Q14314 439 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PLS1Q14651 629 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 C19orf54Q5BKX5 351 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 PHF19Q5T6S3 580 aa4.76□□□□□ -1.65
TDP1-207ENST00000553617 FAM180AQ6UWF9 173 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms