RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ADCY7P51828 1080 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 ADCY1Q08828 1119 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 AP3B2Q13367 1082 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 FZD5Q13467 585 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 IL31Q6EBC2 164 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 TYW1BQ6NUM6 668 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CASC1Q6TDU7 716 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 ZNF852Q6ZMS4 543 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CATSPER4Q7RTX7 472 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 MRPL10Q7Z7H8 261 aaKnown RBP15.56■□□□□ 0.08
PRPF39-204ENST00000553605 GLYCTKQ8IVS8 523 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 TMTC2Q8N394 836 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 FGF13Q92913 245 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 CHST7Q9NS84 486 aa15.56■□□□□ 0.08
PRPF39-204ENST00000553605 MRPS17Q9Y2R5 130 aaKnown RBP15.56■□□□□ 0.08
PRPF39-204ENST00000553605 FRYQ5TBA9 3013 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 MTCL1Q9Y4B5 1905 aaKnown RBP15.55■□□□□ 0.08
PRPF39-204ENST00000553605 CNTNAP2Q9UHC6 1331 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 SMCO2A6NFE2 343 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 TDGF1P13385 188 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 NTHL1P78549 312 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 PRKCEQ02156 737 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 PTH1RQ03431 593 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 PPP2R5DQ14738 602 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 TMTC3Q6ZXV5 915 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 COLGALT2Q8IYK4 626 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 KXD1Q9BQD3 176 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 PHF20Q9BVI0 1012 aa15.55■□□□□ 0.08
PRPF39-204ENST00000553605 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.55■□□□□ 0.08
PRPF39-204ENST00000553605 WDR64B1ANS9 1081 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 FOXD2O60548 495 aaPredicted RBP15.54■□□□□ 0.08
PRPF39-204ENST00000553605 CYP3A4P08684 503 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 CLK2P49760 499 aaKnown RBP15.54■□□□□ 0.08
PRPF39-204ENST00000553605 DNM2P50570 870 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 PPP1R18Q6NYC8 613 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 ZNF410Q86VK4 478 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 RAB11FIP4Q86YS3 637 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 FANCBQ8NB91 859 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 B3GALT6Q96L58 329 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 MTA3Q9BTC8 594 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 FNIP2Q9P278 1114 aa15.54■□□□□ 0.08
PRPF39-204ENST00000553605 PRC1O43663 620 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 SETQ01105 290 aaPredicted RBP15.53■□□□□ 0.08
PRPF39-204ENST00000553605 SIM2Q14190 667 aaPredicted RBP15.53■□□□□ 0.08
PRPF39-204ENST00000553605 TARBP2Q15633 366 aaKnown RBP15.53■□□□□ 0.08
PRPF39-204ENST00000553605 MAMSTRQ6ZN01 415 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 GPR65Q8IYL9 337 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 CRYGNQ8WXF5 182 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 MBOAT7Q96N66 472 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 GLT8D2Q9H1C3 349 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 DISC1Q9NRI5 854 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 HEBP1Q9NRV9 189 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 AGPAT5Q9NUQ2 364 aa15.53■□□□□ 0.08
PRPF39-204ENST00000553605 F8W810 466 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
PRPF39-204ENST00000553605 NR1I2O75469 434 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 RPL17P18621 184 aaKnown RBP15.52■□□□□ 0.08
PRPF39-204ENST00000553605 UGCGQ16739 394 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 USP41Q3LFD5 358 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 JAKMIP3Q5VZ66 844 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 KSR1Q8IVT5 923 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 TMEM87BQ96K49 555 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 COLEC11Q9BWP8 271 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 CHRDQ9H2X0 955 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 UBN1Q9NPG3 1134 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 SUCLA2Q9P2R7 463 aaPredicted RBP15.52■□□□□ 0.08
PRPF39-204ENST00000553605 ZMIZ1Q9ULJ6 1067 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 SLC12A7Q9Y666 1083 aa15.52■□□□□ 0.08
PRPF39-204ENST00000553605 SPEGQ15772 3267 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 DOCK6Q96HP0 2047 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 PKD1L2Q7Z442 2459 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 IGKV6-21A0A0C4DH24 114 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 SHISA7A6NL88 538 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 HNRNPA1P09651 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRPF39-204ENST00000553605 LIFRP42702 1097 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 CREMQ03060 361 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 MTERF2Q49AM1 385 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.51■□□□□ 0.07
PRPF39-204ENST00000553605 COL26A1Q96A83 441 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 NIFKQ9BYG3 293 aaKnown RBP15.51■□□□□ 0.07
PRPF39-204ENST00000553605 GPR62Q9BZJ7 368 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 NDRG2Q9UN36 371 aaKnown RBP15.51■□□□□ 0.07
PRPF39-204ENST00000553605 POLIQ9UNA4 740 aa15.51■□□□□ 0.07
PRPF39-204ENST00000553605 FASNP49327 2511 aaKnown RBP15.5■□□□□ 0.07
PRPF39-204ENST00000553605 ZZEF1O43149 2961 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 ANKRD11Q6UB99 2663 aaPredicted RBP15.5■□□□□ 0.07
PRPF39-204ENST00000553605 TM4SF5O14894 197 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 HRO43593 1189 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 ITGA4P13612 1032 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
PRPF39-204ENST00000553605 MCM5P33992 734 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 CCR3P51677 355 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 LIMK1P53667 647 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 DSC1Q08554 894 aa15.5■□□□□ 0.07
PRPF39-204ENST00000553605 PRR16Q569H4 304 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms