RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 PRSS33Q8NF86 280 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 NECTIN4Q96NY8 510 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 POLR3FQ9H1D9 316 aaPredicted RBP16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 DZANK1Q9NVP4 752 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 IPPQ9Y573 584 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 KMT2EQ8IZD2 1858 aa16.79■□□□□ 0.28
SDR39U1-205ENST00000553546 INPPL1O15357 1258 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 ALDH2P05091 517 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 MUTP22033 750 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 RPA1P27694 616 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 EDAQ92838 391 aa16.78■□□□□ 0.28
SDR39U1-205ENST00000553546 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 LRRIQ4A6NIV6 560 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 MED24O75448 989 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 NR1I2O75469 434 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 DDHD2O94830 711 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 POMCP01189 267 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 ARF4P18085 180 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 ZNF174Q15697 407 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 AMHR2Q16671 573 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 C8orf34Q49A92 452 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 SLC27A1Q6PCB7 646 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 ZBTB8OSQ8IWT0 167 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 CPB2Q96IY4 423 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 PRIMPOLQ96LW4 560 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 GIT1Q9Y2X7 761 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 NR2E1Q9Y466 385 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 KIF3AQ9Y496 699 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 STK24Q9Y6E0 443 aa16.77■□□□□ 0.28
SDR39U1-205ENST00000553546 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 ARL5CA6NH57 179 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 NRP1O14786 923 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 B4GALT3O60512 393 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 MLH1P40692 756 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 MTHFRP42898 656 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 AFF1P51825 1210 aaKnown RBP16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 MFSD14AQ96MC6 490 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 KIF2CQ99661 725 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 APOL5Q9BWW9 433 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 RAB34Q9BZG1 259 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 C2orf40Q9H1Z8 148 aa16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-205ENST00000553546 A0A1B0GUA9 196 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 ARHGEF35A5YM69 484 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 URODP06132 367 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 FXR2P51116 673 aaKnown RBP eCLIP16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 PPP2R5AQ15172 486 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 CDCA2Q69YH5 1023 aaPredicted RBP16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 COLGALT2Q8IYK4 626 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 GAD1Q99259 594 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 VN1R3Q9BXE9 311 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 GPRC5CQ9NQ84 441 aa16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 MRPL17Q9NRX2 175 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-205ENST00000553546 A0A087WWV3 80 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 B4GALT5O43286 388 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 ST18O60284 1047 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 SOD2P04179 222 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 CYP11B2P19099 503 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.274e-9■■□□□ 13.6
SDR39U1-205ENST00000553546 OR1G1P47890 313 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 SCNN1GP51170 649 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 ZXDAP98168 799 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 DSC1Q08554 894 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 RABEP1Q15276 862 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 IER5LQ5T953 404 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 KIAA1841Q6NSI8 718 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 PADI6Q6TGC4 694 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 TRIM67Q6ZTA4 783 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 BMP8AQ7Z5Y6 402 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 CABP7Q86V35 215 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 SLC22A17Q8WUG5 538 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 HERC2P3Q9BVR0 1158 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 APOL6Q9BWW8 343 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 SFXN1Q9H9B4 322 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 PRG3Q9Y2Y8 225 aaPredicted RBP16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 HES2Q9Y543 173 aa16.74■□□□□ 0.27
SDR39U1-205ENST00000553546 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
SDR39U1-205ENST00000553546 LAD1O00515 517 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms