RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SP100P23497 879 aaPredicted RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 ALDH7A1P49419 539 aaKnown RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 ATP2C1P98194 919 aaPredicted RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 RAD51AP2Q09MP3 1159 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 SMAD4Q13485 552 aaKnown RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 SMAD2Q15796 467 aaKnown RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 FAM173BQ6P4H8 233 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 DAW1Q8N136 415 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 B3GALT6Q96L58 329 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 PDZD7Q9H5P4 517 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
SHMT2-206ENST00000553529 USP15Q9Y4E8 981 aaPredicted RBP20.18■□□□□ 0.82
SHMT2-206ENST00000553529 TDRD15B5MCY1 1934 aaKnown RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 VWA3AA6NCI4 1184 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 MYBP10242 640 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 IGFBP6P24592 240 aaPredicted RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 CSPP1Q1MSJ5 1256 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 HAUS3Q68CZ6 603 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 SYCE2Q6PIF2 218 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 FAM43BQ6ZT52 329 aaPredicted RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 C12orf76Q8N812 135 aaPredicted RBP20.17■□□□□ 0.82
SHMT2-206ENST00000553529 SMRP1Q8NCR6 262 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 PGBD4Q96DM1 585 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 PAAF1Q9BRP4 392 aa20.17■□□□□ 0.82
SHMT2-206ENST00000553529 NPHP3-ACAD11A0A0J9YXS1 232 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.16■□□□□ 0.82
SHMT2-206ENST00000553529 SFI1A8K8P3 1242 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 NRP1O14786 923 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 CLASP2O75122 1294 aaKnown RBP20.16■□□□□ 0.82
SHMT2-206ENST00000553529 SKIP12755 728 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 PPM1AP35813 382 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 KRT17Q04695 432 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 POU5F1BQ06416 359 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 MAPK7Q13164 816 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 CUL4AQ13619 759 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 DTHD1Q6ZMT9 781 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 COLGALT2Q8IYK4 626 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 TMEM130Q8N3G9 435 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 MRPL43Q8N983 215 aaKnown RBP20.16■□□□□ 0.82
SHMT2-206ENST00000553529 MCPH1Q8NEM0 835 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 URGCPQ8TCY9 931 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 TMEM169Q96HH4 297 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 NFKBIZQ9BYH8 718 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 FZD8Q9H461 694 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 HCFC2Q9Y5Z7 792 aa20.16■□□□□ 0.82
SHMT2-206ENST00000553529 A0A1B0GUA9 196 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 HIP1RO75146 1068 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 CXCL14O95715 111 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 PRKCBP05771 671 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 EPCAMP16422 314 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 COASYQ13057 564 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 SMC1AQ14683 1233 aaKnown RBP20.15■□□□□ 0.82
SHMT2-206ENST00000553529 NT5DC1Q5TFE4 455 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 TAS1R3Q7RTX0 852 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 S1PR5Q9H228 398 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 SNTG2Q9NY99 539 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 PARP2Q9UGN5 583 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
SHMT2-206ENST00000553529 CNTNAP2Q9UHC6 1331 aa20.15■□□□□ 0.82
SHMT2-206ENST00000553529 PLXNA3P51805 1871 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 VPS37CA5D8V6 355 aaPredicted RBP20.14■□□□□ 0.81
SHMT2-206ENST00000553529 C19orf67A6NJJ6 358 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 C2CD2LO14523 706 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 NCK2O43639 380 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 EYA4O95677 639 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 AXLP30530 894 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 OR1G1P47890 313 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 PDIA5Q14554 519 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 RILPL1Q5EBL4 403 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 ANKRD54Q6NXT1 300 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 SLC27A1Q6PCB7 646 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 PPP4R3CPQ6ZMV5 832 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 ADHFE1Q8IWW8 467 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 CEP120Q8N960 986 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 DEPTORQ8TB45 409 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 PPP2R3CQ969Q6 453 aa20.14■□□□□ 0.81
SHMT2-206ENST00000553529 TRIM6Q9C030 488 aaPredicted RBP20.14■□□□□ 0.81
SHMT2-206ENST00000553529 PRPHP41219 470 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 PEX3P56589 373 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 DSC1Q08554 894 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 PRPF4BQ13523 1007 aaKnown RBP20.13■□□□□ 0.81
SHMT2-206ENST00000553529 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 PUS10Q3MIT2 529 aaKnown RBP20.13■□□□□ 0.81
SHMT2-206ENST00000553529 KRT79Q5XKE5 535 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 RINT1Q6NUQ1 792 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 DDX53Q86TM3 631 aaKnown RBP20.13■□□□□ 0.81
SHMT2-206ENST00000553529 ZBTB8OSQ8IWT0 167 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 HASPINQ8TF76 798 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 NGRNQ9NPE2 291 aaKnown RBP20.13■□□□□ 0.81
SHMT2-206ENST00000553529 MUTYHQ9UIF7 546 aa20.13■□□□□ 0.81
SHMT2-206ENST00000553529 PTGESO14684 152 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 CTSAP10619 480 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 NAMPTP43490 491 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 MCM2P49736 904 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 SPECC1Q5M775 1068 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 C1orf186Q6ZWK4 172 aa20.12■□□□□ 0.81
SHMT2-206ENST00000553529 FAM193BQ96PV7 902 aaPredicted RBP20.12■□□□□ 0.81
SHMT2-206ENST00000553529 PRMT7Q9NVM4 692 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms