RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 MSCO60682 206 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 EFCAB14O75071 495 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 VIL1P09327 827 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 MYCLP1P12525 358 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 LCP1P13796 627 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 TACR1P25103 407 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 IL15P40933 162 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 IRX6P78412 446 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 HTRA3P83110 453 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 TMEM62Q0P6H9 643 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 GRM1Q13255 1194 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 MVPQ14764 893 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 RABL6Q3YEC7 729 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 E4F1Q66K89 784 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 OLFML2BQ68BL8 750 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 CNTROBQ8N137 903 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 DPF3Q92784 378 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 DCPSQ96C86 337 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 FAM84BQ96KN1 310 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 TMX1Q9H3N1 280 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 HDAC9Q9UKV0 1011 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 CNOT6Q9ULM6 557 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 SCAF8Q9UPN6 1271 aaKnown RBP5.7□□□□□ -1.5
ATXN3-220ENST00000553491 COL4A3BPQ9Y5P4 624 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 MYH7P12883 1935 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 HMMRO75330 724 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 RASGRP1O95267 797 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 CRTAMO95727 393 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 PI3P19957 117 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 LTBRP36941 435 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 FSTL1Q12841 308 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 PUM3Q15397 648 aaKnown RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 INF2Q27J81 1249 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 STRIP1Q5VSL9 837 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 BICRALQ6AI39 1079 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 IQCEQ6IPM2 695 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 ZC3H14Q6PJT7 736 aaKnown RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 RSPO2Q6UXX9 243 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 USP50Q70EL3 339 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 LRRTM3Q86VH5 581 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 LPIN2Q92539 896 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 DIO2Q92813 273 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 TARS2Q9BW92 718 aaKnown RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 GPR27Q9NS67 375 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 INTS7Q9NVH2 962 aaKnown RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 MAGEC2Q9UBF1 373 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 GULP1Q9UBP9 304 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 EXOC6BQ9Y2D4 811 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 RWDD3Q9Y3V2 267 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 TNPO3Q9Y5L0 923 aaKnown RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 ADAMTSL1Q8N6G6 1762 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 UTRNP46939 3433 aa5.69□□□□□ -1.5
ATXN3-220ENST00000553491 ZNF646O15015 1829 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-220ENST00000553491 MYH1P12882 1939 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 MYH8P13535 1937 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 TRBV23OR9-2A0A075B6M9 112 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 TCRBV16S1A1N1A0A5B0 115 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ZC3H12DA2A288 527 aaKnown RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 TRAF5O00463 557 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 AQP7O14520 342 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 CIAO1O76071 339 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 SASH1O94885 1247 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 HSPA6P17066 643 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ADORA1P30542 326 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 NCKAP1LP55160 1127 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 RRP1P56182 461 aaKnown RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 GPR85P60893 370 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 PRR5P85299 388 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 AMPD3Q01432 767 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 KCNAB2Q13303 367 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 PRKG1Q13976 671 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 DLGAP5Q15398 846 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ZNF385BQ569K4 471 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 MFSD14BQ5SR56 506 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 DLK2Q6UY11 383 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 KRT26Q7Z3Y9 468 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 AGBL3Q8NEM8 1001 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 DPF2Q92785 391 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 MAGEB10Q96LZ2 347 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms