RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
MTHFD1-204ENST00000553405 STYXL1Q9Y6J8 313 aa16.31■□□□□ 0.2
MTHFD1-204ENST00000553405 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 ANKRD63C9JTQ0 380 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 FAM189A1O60320 539 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 ZNF623O75123 536 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 ERLIN2O94905 339 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 PRPF6O94906 941 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 GCNT3O95395 438 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 MORC3Q14149 939 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 SMG8Q8ND04 991 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 RNF19AQ9NV58 838 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 EXOC1Q9NV70 894 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 GDAQ9Y2T3 454 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
MTHFD1-204ENST00000553405 UBE4BO95155 1302 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 EFCAB14O75071 495 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 SMC2O95347 1197 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 ADSSP30520 456 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 ABCD1P33897 745 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 ATF7IP2Q5U623 682 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 NOTUMQ6P988 496 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 SLC24A5Q71RS6 500 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 MRPL10Q7Z7H8 261 aaKnown RBP16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 SMARCE1Q969G3 411 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 ZBTB45Q96K62 511 aaPredicted RBP16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 CDT1Q9H211 546 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
MTHFD1-204ENST00000553405 MEIS3P2A8K0S8 358 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 TOM1L1O75674 476 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 ACTN1P12814 892 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 MCL1Q07820 350 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 STRN3Q13033 797 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 NFKBIBQ15653 356 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 SLC27A1Q6PCB7 646 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 TMCO2Q7Z6W1 182 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 ECHDC2Q86YB7 292 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 SMYD4Q8IYR2 804 aaPredicted RBP16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 TOP1MTQ969P6 601 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 ACCSQ96QU6 501 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 C1orf112Q9NSG2 853 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 FAM105AQ9NUU6 356 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 PCDHB2Q9Y5E7 798 aa16.28■□□□□ 0.2
MTHFD1-204ENST00000553405 A0A0B4J269 797 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 N4BP3O15049 544 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 ZSCAN20P17040 1043 aaPredicted RBP16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 TWF2Q6IBS0 349 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 GUF1Q8N442 669 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 TMEM174Q8WUU8 243 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 ELAC1Q9H777 363 aaKnown RBP16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 RMND1Q9NWS8 449 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 IPPQ9Y573 584 aa16.27■□□□□ 0.2
MTHFD1-204ENST00000553405 HNRNPDLO14979 420 aaKnown RBP16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 NPTXRO95502 500 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 RAB27AP51159 221 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 AGMOQ6ZNB7 445 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 TDHQ8IZJ6 230 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 ADSSL1Q8N142 457 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 CEP120Q8N960 986 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 ZSWIM2Q8NEG5 633 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 RNPC3Q96LT9 517 aaKnown RBP16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 HES2Q9Y543 173 aa16.26■□□□□ 0.19
MTHFD1-204ENST00000553405 PPP1R3GB7ZBB8 358 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 INPPL1O15357 1258 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 GJB5O95377 273 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 MCF2P10911 925 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 PRCPP42785 496 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 HTRA4P83105 476 aaPredicted RBP16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 KNOP1Q1ED39 458 aaKnown RBP16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 DCAF4L1Q3SXM0 396 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 CLLU1OSQ5K130 101 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 ZBTB41Q5SVQ8 909 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
MTHFD1-204ENST00000553405 NPAS4Q8IUM7 802 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms