RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 UBE3CQ15386 1083 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-217ENST00000553287 OR5M3Q8NGP4 307 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 ZNF512Q96ME7 567 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-217ENST00000553287 CSRNP2Q9H175 543 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
ATXN3-217ENST00000553287 AURKAIP1Q9NWT8 199 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-217ENST00000553287 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 HOXA3O43365 443 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-217ENST00000553287 EYA4O95677 639 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 VIL1P09327 827 aaKnown RBP6.54□□□□□ -1.36
ATXN3-217ENST00000553287 CASRP41180 1078 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 DGCR2P98153 550 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 CRHR2Q13324 411 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 FSCN1Q16658 493 aaKnown RBP6.54□□□□□ -1.36
ATXN3-217ENST00000553287 IQSEC1Q6DN90 963 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 GLB1L2Q8IW92 636 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 CMIPQ8IY22 773 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 Q8N1X5 172 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 PLEKHG4BQ96PX9 1271 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
ATXN3-217ENST00000553287 NRP1O14786 923 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 STC2O76061 302 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 SCNN1GP51170 649 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 CNGB1Q14028 1251 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-217ENST00000553287 MIIPQ5JXC2 388 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 Q6ZRM9 215 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
ATXN3-217ENST00000553287 EPC1Q9H2F5 836 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 EDARQ9UNE0 448 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 PRKAB1Q9Y478 270 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 MAPKBP1O60336 1514 aa6.53□□□□□ -1.36
ATXN3-217ENST00000553287 PPRC1Q5VV67 1664 aaKnown RBP6.52□□□□□ -1.37
ATXN3-217ENST00000553287 FHAD1B1AJZ9 1412 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 FZD7O75084 574 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 C1SP09871 688 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
ATXN3-217ENST00000553287 ENPP1P22413 925 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 SCAND1P57086 179 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 TMPRSS15P98073 1019 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 DUSP2Q05923 314 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 FAPQ12884 760 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 LHFPL2Q6ZUX7 228 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 GPR87Q9BY21 358 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
ATXN3-217ENST00000553287 ZNF703Q9H7S9 590 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-217ENST00000553287 XDHP47989 1333 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 RUSC2Q8N2Y8 1516 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
ATXN3-217ENST00000553287 GNAT2P19087 354 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 GDF5P43026 501 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 MAN2A2P49641 1150 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 PTH1RQ03431 593 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-217ENST00000553287 FAM214AQ32MH5 1076 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 LSM12Q3MHD2 195 aaKnown RBP6.51□□□□□ -1.37
ATXN3-217ENST00000553287 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 USP51Q70EK9 711 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 MB21D1Q8N884 522 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 ATL2Q8NHH9 583 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 WDR66Q8TBY9 1149 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 LMBR1Q8WVP7 490 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
ATXN3-217ENST00000553287 ST8SIA2Q92186 375 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 PARPBPQ9NWS1 579 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
ATXN3-217ENST00000553287 PRAMEF4O60810 478 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
ATXN3-217ENST00000553287 CFBP00751 764 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 ACVRL1P37023 503 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 CDK17Q00537 523 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-217ENST00000553287 MNTQ99583 582 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-217ENST00000553287 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-217ENST00000553287 CEP72Q9P209 647 aa6.5□□□□□ -1.37
ATXN3-217ENST00000553287 GPR39O43194 453 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 CTSSP25774 331 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 GZMKP49863 264 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 RABGGTBP53611 331 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 WNT3AP56704 352 aa6.49□□□□□ -1.37
ATXN3-217ENST00000553287 MRPL49Q13405 166 aaKnown RBP6.49□□□□□ -1.37
ATXN3-217ENST00000553287 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
ATXN3-217ENST00000553287 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms