RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 IQCGQ9H095 443 aaKnown RBP7.92□□□□□ -1.14
BEST3-212ENST00000553096 DDX47Q9H0S4 455 aaKnown RBP7.92□□□□□ -1.14
BEST3-212ENST00000553096 NEUROG2Q9H2A3 272 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 CCDC134Q9H6E4 229 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 BCAS3Q9H6U6 928 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 CNOT8Q9UFF9 292 aaKnown RBP7.92□□□□□ -1.14
BEST3-212ENST00000553096 PARP2Q9UGN5 583 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 HERC5Q9UII4 1024 aaKnown RBP7.92□□□□□ -1.14
BEST3-212ENST00000553096 AMFRQ9UKV5 643 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 VAV3Q9UKW4 847 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 KIAA1024Q9UPX6 916 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 STXBP5LQ9Y2K9 1186 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 TMX2Q9Y320 296 aa7.92□□□□□ -1.14
BEST3-212ENST00000553096 ARID2Q68CP9 1835 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 IGLV3-22A0A075B6J6 115 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 STK10O94804 968 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 ATP6V1G2O95670 118 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 AFPP02771 609 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 GBP2P32456 591 aaPredicted RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 ELF3P78545 371 aaPredicted RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 ADAM9Q13443 819 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 PRR16Q569H4 304 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 MOXD1Q6UVY6 613 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 MIGA2Q7L4E1 593 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 IRF2BP2Q7Z5L9 587 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 GPIHBP1Q8IV16 184 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 RTKN2Q8IZC4 609 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 AP1M1Q9BXS5 423 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 METTL14Q9HCE5 456 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 HDAC9Q9UKV0 1011 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 SLC12A4Q9UP95 1085 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 DAAM1Q9Y4D1 1078 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 PITPNM2Q9BZ72 1349 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 POLR2AP24928 1970 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 MSH4O15457 936 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 AGTP01019 485 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 ZBTB48P10074 688 aaPredicted RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 UCHL3P15374 230 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 FERP16591 822 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 HSPA6P17066 643 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 CYP11B2P19099 503 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 DRG2P55039 364 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 PTENP60484 403 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 DLGAP5Q15398 846 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 PDCD2Q16342 344 aaPredicted RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 DENND2CQ68D51 928 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 TLDC1Q6P9B6 456 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 ZNF571Q7Z3V5 609 aaPredicted RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 FAM228AQ86W67 206 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 DDX42Q86XP3 938 aaKnown RBP eCLIP7.91□□□□□ -1.14
BEST3-212ENST00000553096 CATSPER3Q86XQ3 398 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 HES6Q96HZ4 224 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 MOV10L1Q9BXT6 1211 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 TXLNGYQ9BZA5 131 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 NOD2Q9HC29 1040 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.91□□□□□ -1.14
BEST3-212ENST00000553096 AMACRQ9UHK6 382 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 CNOT7Q9UIV1 285 aaKnown RBP7.91□□□□□ -1.14
BEST3-212ENST00000553096 NENFQ9UMX5 172 aa7.91□□□□□ -1.14
BEST3-212ENST00000553096 FRMD3A2A2Y4 597 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PHF20L1A8MW92 1017 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PIK3CDO00329 1044 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 EML1O00423 815 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 ZSCAN9O15535 394 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 TTI1O43156 1089 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 CALUO43852 315 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 BUB1BO60566 1050 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 SSBP05455 408 aaKnown RBP eCLIP7.9□□□□□ -1.14
BEST3-212ENST00000553096 MMEP08473 750 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PLA2G4BP0C869 781 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PYGBP11216 843 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 MMP13P45452 471 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 CASP5P51878 434 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 STAT2P52630 851 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 IKQ13123 557 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 DGKZQ13574 1117 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PPP1R7Q15435 360 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 EXOC3L4Q17RC7 722 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 DAAM2Q86T65 1068 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 NT5DC3Q86UY8 548 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 TRIM42Q8IWZ5 723 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 GBP7Q8N8V2 638 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 MAB21L3Q8N8X9 362 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 MTMR14Q8NCE2 650 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 GLT8D2Q9H1C3 349 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PABPC3Q9H361 631 aaKnown RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 KCTD10Q9H3F6 313 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 TBC1D7Q9P0N9 293 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 ARMCX3Q9UH62 379 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 DICER1Q9UPY3 1922 aaKnown RBP7.9□□□□□ -1.14
BEST3-212ENST00000553096 PAPPA2Q9BXP8 1791 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 PTPRFP10586 1907 aa7.9□□□□□ -1.14
BEST3-212ENST00000553096 MEIS1O00470 390 aa7.9□□□□□ -1.15
BEST3-212ENST00000553096 WNT10BO00744 389 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms