RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 SNAPC2Q13487 334 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 BIRC3Q13489 604 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 TFDP1Q14186 410 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 SURF1Q15526 300 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 GJB7Q6PEY0 223 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 GLYCTKQ8IVS8 523 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 UBL4BQ8N7F7 174 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 DHX38Q92620 1227 aaKnown RBP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 GLG1Q92896 1179 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 PSMB7Q99436 277 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 SH2D3AQ9BRG2 576 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 PLVAPQ9BX97 442 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 ASCC2Q9H1I8 757 aaPredicted RBP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 PORCNQ9H237 461 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 BCAS3Q9H6U6 928 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 VIPAS39Q9H9C1 493 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 MED4Q9NPJ6 270 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 ARHGAP28Q9P2N2 729 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
CNOT2-243ENST00000553078 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
CNOT2-243ENST00000553078 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 MIF4GDA9UHW6 222 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 CCDC188H7C350 402 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 KCNK3O14649 394 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 ZNF185O15231 689 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 NCK2O43639 380 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 SORBS3O60504 671 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 ATG7O95352 703 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TBC1D8O95759 1140 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 DLATP10515 647 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 EDNRBP24530 442 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 SLC26A2P50443 739 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 GPC3P51654 580 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 AP3M2P53677 418 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 GALCP54803 685 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TTLL4Q14679 1199 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 BEND6Q5SZJ8 279 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 CBWD2Q8IUF1 395 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 CREG2Q8IUH2 290 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 RPUSD2Q8IZ73 545 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 SHCBP1Q8NEM2 672 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 PARD3BQ8TEW8 1205 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 PSPC1Q8WXF1 523 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 CCDC102AQ96A19 550 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 PNKPQ96T60 521 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TLR10Q9BXR5 811 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 PACSIN1Q9BY11 444 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 NIFKQ9BYG3 293 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TMEM117Q9H0C3 514 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 DHX33Q9H6R0 707 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 RAB20Q9NX57 234 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 STIM2Q9P246 746 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 CTTNBP2NLQ9P2B4 639 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 SUCLA2Q9P2R7 463 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 AGO2Q9UKV8 859 aaKnown RBP11.02□□□□□ -0.65
CNOT2-243ENST00000553078 USP20Q9Y2K6 914 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 SYNGAP1Q96PV0 1343 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 ARID2Q68CP9 1835 aa11.02□□□□□ -0.65
CNOT2-243ENST00000553078 RLFQ13129 1914 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
CNOT2-243ENST00000553078 CEP104O60308 925 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 PHACTR2O75167 634 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 RTN2O75298 545 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 RGS20O76081 388 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 PIGRP01833 764 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 ADRB2P07550 413 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 KRT5P13647 590 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 HSPA6P17066 643 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 TNNI1P19237 187 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 ABCB4P21439 1286 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
CNOT2-243ENST00000553078 TNFRSF8P28908 595 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
CNOT2-243ENST00000553078 CXCR5P32302 372 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 TCF7P36402 384 aaPredicted RBP11.01□□□□□ -0.65
CNOT2-243ENST00000553078 CNTN2Q02246 1040 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 GCNT1Q02742 428 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 PPP3CAQ08209 521 aa11.01□□□□□ -0.65
CNOT2-243ENST00000553078 MXD4Q14582 209 aaPredicted RBP11.01□□□□□ -0.65
CNOT2-243ENST00000553078 CASP8Q14790 479 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms