RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 USP4Q13107 963 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 C19orf48Q6RUI8 117 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ZNF605Q86T29 641 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 FCHSD1Q86WN1 690 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 TRMT2AQ8IZ69 625 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 KBTBD3Q8NAB2 608 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 AUTS2Q8WXX7 1259 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 PIK3R5Q8WYR1 880 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ARRDC1-AS1Q9H2J1 176 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ADAMTS10Q9H324 1103 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 LMAN1LQ9HAT1 526 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 METTL5Q9NRN9 209 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 RTEL1Q9NZ71 1219 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 PCDHGA5Q9Y5G8 931 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 NAV1Q8NEY1 1877 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ASH1LQ9NR48 2969 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 GCN1Q92616 2671 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 A0A0U1RQF3 1178 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 CAPN8A6NHC0 703 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 H0Y626 953 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 MGEA5O60502 916 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 TRIM16O95361 564 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 GLUD1P00367 558 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 CHGBP05060 677 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 P4HBP07237 508 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 FGRP09769 529 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 GOLGA8HP0CJ92 632 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 NCLP19338 710 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 SPINK2P20155 84 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 KLRC1P26715 233 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 MARK3P27448 753 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 RNASELQ05823 741 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 QRICH1Q2TAL8 776 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 OXLD1Q5BKU9 147 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 RRP12Q5JTH9 1297 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 DMRTA1Q5VZB9 504 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 ZKSCAN2Q63HK3 967 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 DIEXFQ68CQ4 756 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 MTHFD1LQ6UB35 978 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 PARM1Q6UWI2 310 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 TPRG1Q6ZUI0 275 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 PLPPR4Q7Z2D5 763 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 CACNA2D4Q7Z3S7 1137 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 DGKHQ86XP1 1220 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 ECHDC2Q86YB7 292 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 TMEM57Q8N5G2 664 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 FAM160A2Q8N612 972 aaPredicted RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 RNF169Q8NCN4 708 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 INPP4AQ96PE3 977 aaPredicted RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 MKNK1Q9BUB5 465 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 RPP25Q9BUL9 199 aaKnown RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 PRKD2Q9BZL6 878 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 NT5C3AQ9H0P0 336 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 CHRDQ9H2X0 955 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 SLC32A1Q9H598 525 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
CKAP4-203ENST00000553039 MAN1C1Q9NR34 630 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 VPS45Q9NRW7 570 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 ZDHHC7Q9NXF8 308 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 DACT1Q9NYF0 836 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 HCSTQ9UBK5 93 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 DACH1Q9UI36 760 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 ANAPC4Q9UJX5 808 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 CDH7Q9ULB5 785 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 WASF3Q9UPY6 502 aa5.9□□□□□ -1.46
CKAP4-203ENST00000553039 FANCMQ8IYD8 2048 aa5.9□□□□□ -1.47
CKAP4-203ENST00000553039 MYO5AQ9Y4I1 1855 aaKnown RBP5.9□□□□□ -1.47
CKAP4-203ENST00000553039 GSTTP1A0A1W2PQM5 241 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 C4orf47A7E2U8 309 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 ESPNB1AK53 854 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 CHURC1-FNTBB4DL54 471 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 ANP32CO43423 234 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 ZC3H11AO75152 810 aaKnown RBP eCLIP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 GALTP07902 379 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 PARP1P09874 1014 aaKnown RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 PCP11498 1178 aaKnown RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 TDGF1P13385 188 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 TARSP26639 723 aaKnown RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 HOXA6P31267 233 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 HOXA13P31271 388 aaPredicted RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 FNTBP49356 437 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 NT5C2P49902 561 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 SLC26A2P50443 739 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 STAT5BP51692 787 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 AK2P54819 239 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 TROAPQ12815 778 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 FZD5Q13467 585 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 DSC3Q14574 896 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 WTAPQ15007 396 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 SF3A2Q15428 464 aaKnown RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 ASPRV1Q53RT3 343 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 CEP85Q6P2H3 762 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 GET4Q7L5D6 327 aaPredicted RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 PROSER1Q86XN7 944 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 FTSJ3Q8IY81 847 aaKnown RBP5.89□□□□□ -1.47
CKAP4-203ENST00000553039 KIAA0319LQ8IZA0 1049 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 SPEM1Q8N4L4 309 aa5.89□□□□□ -1.47
CKAP4-203ENST00000553039 FAM193BQ96PV7 902 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms