RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TMEM161AQ9NX61 479 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 ZFHX2Q9C0A1 2572 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 FAM186AA6NE01 2351 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 IGKV6D-21A0A0A0MT36 114 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 ASGR2P07307 311 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 PLCG1P19174 1290 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 PBX3P40426 434 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 POLGP54098 1239 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-218ENST00000552839 TBC1D8BQ0IIM8 1120 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 DSC3Q14574 896 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 PLA2G4FQ68DD2 849 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 C4orf19Q8IY42 314 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 EXOC8Q8IYI6 725 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 CASP10Q92851 521 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 DHX58Q96C10 678 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 JPH2Q9BR39 696 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-218ENST00000552839 TMEM117Q9H0C3 514 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 ADAM7Q9H2U9 754 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 MAFBQ9Y5Q3 323 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-218ENST00000552839 HCFC2Q9Y5Z7 792 aa12.6□□□□□ -0.39
TMEM116-218ENST00000552839 COL1A2P08123 1366 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
TMEM116-218ENST00000552839 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
TMEM116-218ENST00000552839 SLITRK3O94933 977 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 WEE2P0C1S8 567 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 TMOD1P28289 359 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ITIH3Q06033 890 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 DHX8Q14562 1220 aaKnown RBP12.59□□□□□ -0.39
TMEM116-218ENST00000552839 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ZNF484Q5JVG2 852 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 RESP18Q5W5W9 173 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-218ENST00000552839 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 FRMD5Q7Z6J6 570 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 METTL13Q8N6R0 699 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 IQUBQ8NA54 791 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 PIGOQ8TEQ8 1089 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 SLC7A3Q8WY07 619 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 SCLT1Q96NL6 688 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 OSMRQ99650 979 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 CCSER1Q9C0I3 900 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-218ENST00000552839 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 STK17AQ9UEE5 414 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
TMEM116-218ENST00000552839 A0A1B0GVL5 298 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 CLASP2O75122 1294 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 GPR32O75388 356 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 LYPLA2O95372 231 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 VTNP04004 478 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 PFKFB1P16118 471 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 ATP4AP20648 1035 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 PTMSP20962 102 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 CMA1P23946 247 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 PPM1AP35813 382 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 SYKP43405 635 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 ID4P47928 161 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 DNM2P50570 870 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 CRYBB1P53674 252 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 UBE2HP62256 183 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 KRT17Q04695 432 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 RIF1Q5UIP0 2472 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 ERMP1Q7Z2K6 904 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 MRPL43Q8N983 215 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 TMEM87AQ8NBN3 555 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 LARP4BQ92615 738 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 NKD2Q969F2 451 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 MAP7D2Q96T17 732 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 LRRC27Q9C0I9 530 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 BHMT2Q9H2M3 363 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 LIMD1Q9UGP4 676 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.4
TMEM116-218ENST00000552839 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 PPME1Q9Y570 386 aa12.58□□□□□ -0.4
TMEM116-218ENST00000552839 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 E9PMD0 336 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 MAGEB2O15479 319 aa12.57□□□□□ -0.4
TMEM116-218ENST00000552839 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
TMEM116-218ENST00000552839 ZNF862O60290 1169 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms