RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 SLFN12LQ6IEE8 588 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 SLC39A4Q6P5W5 647 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 RNF149Q8NC42 400 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
CACNB3-224ENST00000552812 OR8K1Q8NGG5 319 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 DNAJC7Q99615 494 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 CCDC113Q9H0I3 377 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
CACNB3-224ENST00000552812 KPNA6O60684 536 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 TRPA1O75762 1119 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 VEGFBP49765 207 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 IGBP1P78318 339 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 ZBED6P86452 979 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 GRIK4Q16099 956 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 MTHFD1LQ6UB35 978 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 USP37Q86T82 979 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 POMGNT1Q8WZA1 660 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 KATNAL1Q9BW62 490 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 KIAA1586Q9HCI6 787 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 SPTLC3Q9NUV7 552 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 NRCAMQ92823 1304 aa12.29□□□□□ -0.44
CACNB3-224ENST00000552812 SEPT4O43236 478 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 N4BP1O75113 896 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 KLK7P49862 253 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 CLCN3P51790 818 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 VAMP7P51809 220 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 PTENP60484 403 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 NKX3-2P78367 333 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 SNRNP35Q16560 246 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 FSCN1Q16658 493 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 MAPK6Q16659 721 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 EXOC3L4Q17RC7 722 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 GPD1LQ8N335 351 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 CCDC155Q8N6L0 562 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 TRPV1Q8NER1 839 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 NEK11Q8NG66 645 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 KAT2BQ92831 832 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 LENG1Q96BZ8 264 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 MRPL4Q9BYD3 311 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 SRRDQ9UH36 339 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 RNF225M0QZC1 329 aaPredicted RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 HAS3O00219 553 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 P4HA2O15460 535 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 MSCO60682 206 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 SRGAP2CP0DJJ0 459 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 CLCN1P35523 988 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 FMO5P49326 533 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 GJA9P57773 515 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 MFSD10Q14728 455 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 NOLC1Q14978 699 aaKnown RBP eCLIP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 GBP6Q6ZN66 633 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 NUCKS1Q9H1E3 243 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
CACNB3-224ENST00000552812 AGPAT5Q9NUQ2 364 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 CEP72Q9P209 647 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 FBXL5Q9UKA1 691 aa12.28□□□□□ -0.44
CACNB3-224ENST00000552812 KAT6AQ92794 2004 aa12.27□□□□□ -0.44
CACNB3-224ENST00000552812 MBLAC1A4D2B0 266 aaPredicted RBP12.27□□□□□ -0.45
CACNB3-224ENST00000552812 GPR25O00155 361 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 PMM2O15305 246 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 CCP110O43303 1012 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 EXTL3O43909 919 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 TOM1L1O75674 476 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.45
CACNB3-224ENST00000552812 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 HNRNPH3P31942 346 aaKnown RBP12.27□□□□□ -0.45
CACNB3-224ENST00000552812 PHKA2P46019 1235 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 CDC42EP1Q00587 391 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 CAP1Q01518 475 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 ARHGEF6Q15052 776 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 MEA1Q16626 185 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 MARCH8Q5T0T0 291 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 LMBR1Q8WVP7 490 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 MFSD14AQ96MC6 490 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.45
CACNB3-224ENST00000552812 FZD8Q9H461 694 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 SAGE1Q9NXZ1 904 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 PLAGL2Q9UPG8 496 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 DAAM1Q9Y4D1 1078 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 EVPLQ92817 2033 aa12.27□□□□□ -0.45
CACNB3-224ENST00000552812 A0A0B4J269 797 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms