RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 PPFIA2O75334 1257 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 NPTXRO95502 500 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 EYA4O95677 639 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 GNA14O95837 355 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 ANXA13P27216 316 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 HOXD13P35453 343 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PEX19P40855 299 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RAB27AP51159 221 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CASP5P51878 434 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PPP2R5CQ13362 524 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 SLC30A10Q6XR72 485 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TRIM59Q8IWR1 403 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 DRAXINQ8NBI3 349 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TRPM4Q8TD43 1214 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 BAP1Q92560 729 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 DTNBP1Q96EV8 351 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TRIM7Q9C029 511 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TUFT1Q9NNX1 390 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 FAM207AQ9NSI2 230 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CEP72Q9P209 647 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PNMA2Q9UL42 364 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 SCAF8Q9UPN6 1271 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 ZNF536O15090 1300 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SKAP2O75563 359 aaPredicted RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SLITRK3O94933 977 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 AGTP01019 485 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 MMEP08473 750 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 UBXN2AP68543 259 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 EDRF1Q3B7T1 1238 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 GALNTL6Q49A17 601 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 CEP55Q53EZ4 464 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 NBPF12Q5TAG4 269 aaPredicted RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SFMBT2Q5VUG0 894 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SFR1Q86XK3 245 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SCYL3Q8IZE3 742 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 PAIP2Q9BPZ3 127 aaKnown RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.87□□□□□ -0.511e-12■■■□□ 17.4
TUBA1C-209ENST00000552448 TMEM109Q9BVC6 243 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 RUSC1Q9BVN2 902 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 ZHX3Q9H4I2 956 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 EHMT1Q9H9B1 1298 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 GGA3Q9NZ52 723 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 SALL4Q9UJQ4 1053 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 UTP11Q9Y3A2 253 aaKnown RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
TUBA1C-209ENST00000552448 RBBP6Q7Z6E9 1792 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 EME2A4GXA9 379 aaPredicted RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 BUB1O43683 1085 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ATP5HO75947 161 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 SUN1O94901 812 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ICAM1P05362 532 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ATP4AP20648 1035 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 EPS15P42566 896 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 HSD17B4P51659 736 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 COPS2P61201 443 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ADAM9Q13443 819 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 C6orf118Q5T5N4 469 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ANKRD20A3Q5VUR7 823 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 GALNT15Q8N3T1 639 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 PARD3BQ8TEW8 1205 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 NAF1Q96HR8 494 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 DYDC2Q96IM9 177 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 AGBL1Q96MI9 1066 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 TANGO6Q9C0B7 1094 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 POLD4Q9HCU8 107 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 LRRC42Q9Y546 428 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 HIP1RO75146 1068 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 KIF4AO95239 1232 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 FDX1P10109 184 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 ARP10275 920 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 YBX3P16989 372 aaKnown RBP eCLIP11.86□□□□□ -0.516e-19■□□□□ 11
TUBA1C-209ENST00000552448 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 BNIP1Q12981 228 aa11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 KNOP1Q1ED39 458 aaKnown RBP11.86□□□□□ -0.51
TUBA1C-209ENST00000552448 BMT2Q1RMZ1 405 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms