RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ST3GAL5Q9UNP4 418 aa6.15□□□□□ -1.42
HOXB3-213ENST00000552000 WDR81Q562E7 1941 aa6.15□□□□□ -1.43
HOXB3-213ENST00000552000 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SMIM35A0A1B0GVV1 85 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SCO2A0A1W2PP80 73 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 DCDC2BA2VCK2 349 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 PALM3A6NDB9 673 aaPredicted RBP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 C1QTNF9BB2RNN3 333 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 NT5C1B-RDH14C9J2C7 533 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CYTH3O43739 400 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CXCL14O95715 111 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 DCNP07585 359 aaKnown RBP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SP9P0CG40 484 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 METAP2P50579 478 aaKnown RBP eCLIP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 ATXN1P54253 815 aaKnown RBP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 MTHFD1LQ6UB35 978 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CCDC149Q6ZUS6 474 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 VPS52Q8N1B4 723 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SLC39A11Q8N1S5 342 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 LRRC43Q8N309 656 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 NME8Q8N427 588 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 GOLGA6L1Q8N7Z2 621 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 RNF169Q8NCN4 708 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SMARCC2Q8TAQ2 1214 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 TMEM40Q8WWA1 233 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 RSAD2Q8WXG1 361 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CUL5Q93034 780 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 GPRASP2Q96D09 838 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CDHR1Q96JP9 859 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CASD1Q96PB1 797 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 OCSTAMPQ9BR26 566 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 AZI2Q9H6S1 392 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 RIOX1Q9H6W3 641 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 KCNK12Q9HB15 430 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 TIMMDC1Q9NPL8 285 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 RALYQ9UKM9 306 aaKnown RBP6.14□□□□□ -1.43
HOXB3-213ENST00000552000 CA14Q9ULX7 337 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 SALL3Q9BXA9 1300 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 DMXL2Q8TDJ6 3036 aa6.14□□□□□ -1.43
HOXB3-213ENST00000552000 AKAP13Q12802 2813 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 MTCL1Q9Y4B5 1905 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 NBEAQ8NFP9 2946 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 LAMA1P25391 3075 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 APC2O95996 2303 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 ESPNB1AK53 854 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 GNB5O14775 395 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 GPR182O15218 404 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KINO60870 393 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 F11P03951 625 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 ITGB5P18084 799 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KLRC1P26715 233 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 NT5C2P49902 561 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 FAM189BP81408 668 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 TBC1D8BQ0IIM8 1120 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 DSC3Q14574 896 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 GRM4Q14833 912 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 SEC23AQ15436 765 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KIZQ2M2Z5 673 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 CLLU1OSQ5K130 101 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 ODR4Q5SWX8 454 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 GPR149Q86SP6 731 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 CABP7Q86V35 215 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 FAM228AQ86W67 206 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 C1orf210Q8IVY1 113 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KIAA0319LQ8IZA0 1049 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 ABI1Q8IZP0 508 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 SUMF1Q8NBK3 374 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 SLC22A17Q8WUG5 538 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 TNPO1Q92973 898 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 TMEM169Q96HH4 297 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 OSMRQ99650 979 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 KRT23Q9C075 422 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 ELAC1Q9H777 363 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 JPH1Q9HDC5 661 aaPredicted RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 NOP53Q9NZM5 478 aaKnown RBP6.13□□□□□ -1.43
HOXB3-213ENST00000552000 IGSF9Q9P2J2 1179 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 NCDNQ9UBB6 729 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 WNT16Q9UBV4 365 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 SPTA1P02549 2419 aa6.13□□□□□ -1.43
HOXB3-213ENST00000552000 A0A1W2PRU2 124 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 PCNX2A6NKB5 2137 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 MEIS2O14770 477 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 N4BP1O75113 896 aaKnown RBP6.12□□□□□ -1.43
HOXB3-213ENST00000552000 VTNP04004 478 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 GBP2P32456 591 aaPredicted RBP6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ALDH7A1P49419 539 aaKnown RBP6.12□□□□□ -1.43
HOXB3-213ENST00000552000 STAT5BP51692 787 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 PDE1AP54750 535 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 MFAP1P55081 439 aaKnown RBP6.12□□□□□ -1.43
HOXB3-213ENST00000552000 BCAR1P56945 870 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ACTR2P61160 394 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 MTMR1Q13613 665 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 NONOQ15233 471 aaKnown RBP eCLIP6.12□□□□□ -1.433e-6■■■■□ 22.2
HOXB3-213ENST00000552000 LETM2Q2VYF4 491 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ANKRD45Q5TZF3 282 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 CYB5R4Q7L1T6 521 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms