RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TMEM169Q96HH4 297 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 FAM193BQ96PV7 902 aaPredicted RBP20.96■□□□□ 0.95
DDX54-208ENST00000551344 UHRF1Q96T88 793 aaPredicted RBP20.96■□□□□ 0.95
DDX54-208ENST00000551344 RUSC1Q9BVN2 902 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 CCDC113Q9H0I3 377 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 TLE6Q9H808 572 aa20.96■□□□□ 0.95
DDX54-208ENST00000551344 FSD2A1L4K1 749 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 NT5C1B-RDH14C9J2C7 533 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 K7ERI5 159 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 N4BP3O15049 544 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 HIP1RO75146 1068 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 PRKCBP05771 671 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 LTBRP36941 435 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 BMS1Q14692 1282 aaKnown RBP20.95■□□□□ 0.94
DDX54-208ENST00000551344 ADGRD2Q7Z7M1 963 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 ZNF280BQ86YH2 543 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 DAW1Q8N136 415 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 EFHBQ8N7U6 833 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 GAD1Q99259 594 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 PLIN2Q99541 437 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 CDCA3Q99618 268 aaPredicted RBP20.95■□□□□ 0.94
DDX54-208ENST00000551344 TCF25Q9BQ70 676 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 TMEM175Q9BSA9 504 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 NTPCRQ9BSD7 190 aaKnown RBP20.95■□□□□ 0.94
DDX54-208ENST00000551344 RBM19Q9Y4C8 960 aaKnown RBP20.95■□□□□ 0.94
DDX54-208ENST00000551344 HES2Q9Y543 173 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 CLIC4Q9Y696 253 aa20.95■□□□□ 0.94
DDX54-208ENST00000551344 NCOR1O75376 2440 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 ARL5CA6NH57 179 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 H3BQ06 376 aaPredicted RBP20.94■□□□□ 0.94
DDX54-208ENST00000551344 DDHD2O94830 711 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 NPTXRO95502 500 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 PLA2G4BP0C869 781 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 GTF2F1P35269 517 aaKnown RBP eCLIP20.94■□□□□ 0.94
DDX54-208ENST00000551344 NPTX2P47972 431 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 NRIP1P48552 1158 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 AFF1P51825 1210 aaKnown RBP20.94■□□□□ 0.94
DDX54-208ENST00000551344 SLC12A3P55017 1021 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 PEX3P56589 373 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 DMP1Q13316 513 aaPredicted RBP20.94■□□□□ 0.94
DDX54-208ENST00000551344 PTPAQ15257 358 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 TMC7Q7Z402 723 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 RBM23Q86U06 439 aaKnown RBP20.94■□□□□ 0.94
DDX54-208ENST00000551344 CDR2LQ86X02 465 aaPredicted RBP20.94■□□□□ 0.94
DDX54-208ENST00000551344 IGSF21Q96ID5 467 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 ADPGKQ9BRR6 497 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 GBP3Q9H0R5 595 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 TMEM134Q9H6X4 195 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 ENTPD7Q9NQZ7 604 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 STK39Q9UEW8 545 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 PHLPP2Q6ZVD8 1323 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 PLXNA4Q9HCM2 1894 aa20.94■□□□□ 0.94
DDX54-208ENST00000551344 CCDC169A6NNP5 214 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 POMCP01189 267 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 SSBP05455 408 aaKnown RBP eCLIP20.93■□□□□ 0.94
DDX54-208ENST00000551344 GRIN1Q05586 938 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 MAPK7Q13164 816 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 TMEM132AQ24JP5 1023 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 DDX53Q86TM3 631 aaKnown RBP20.93■□□□□ 0.94
DDX54-208ENST00000551344 KIFC3Q9BVG8 833 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 CCSER1Q9C0I3 900 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 NXF3Q9H4D5 531 aaKnown RBP20.93■□□□□ 0.94
DDX54-208ENST00000551344 PDZD7Q9H5P4 517 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 DNAJB4Q9UDY4 337 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 FAM50BQ9Y247 325 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 FAN1Q9Y2M0 1017 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 PCDHGC5Q9Y5F6 944 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 SRPRBQ9Y5M8 271 aaKnown RBP20.93■□□□□ 0.94
DDX54-208ENST00000551344 ZMYM2Q9UBW7 1377 aa20.93■□□□□ 0.94
DDX54-208ENST00000551344 GRXCR2A6NFK2 248 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 TTLL13PA6NNM8 815 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 TNFRSF10AO00220 468 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 LIG1P18858 919 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 MLH1P40692 756 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 SLC11A1P49279 550 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 DUSP6Q16828 381 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 PLPP4Q5VZY2 271 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 PTCRAQ6ISU1 281 aaPredicted RBP20.92■□□□□ 0.94
DDX54-208ENST00000551344 FAM173BQ6P4H8 233 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 MRPL43Q8N983 215 aaKnown RBP20.92■□□□□ 0.94
DDX54-208ENST00000551344 SPIRE2Q8WWL2 714 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 APOL6Q9BWW8 343 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 KMT5AQ9NQR1 393 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 MIOSQ9NXC5 875 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 ARHGAP28Q9P2N2 729 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 PARP2Q9UGN5 583 aa20.92■□□□□ 0.94
DDX54-208ENST00000551344 MORC2Q9Y6X9 1032 aaPredicted RBP20.92■□□□□ 0.94
DDX54-208ENST00000551344 TCF20Q9UGU0 1960 aaKnown RBP20.92■□□□□ 0.94
DDX54-208ENST00000551344 SFI1A8K8P3 1242 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 PER2O15055 1255 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 LINC01565O15544 149 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 HSP90AA1P07900 732 aaKnown RBP20.91■□□□□ 0.94
DDX54-208ENST00000551344 AKAP5P24588 427 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 MARCKSP29966 332 aaPredicted RBP20.91■□□□□ 0.94
DDX54-208ENST00000551344 SMTNP53814 917 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 DLX2Q07687 328 aaPredicted RBP20.91■□□□□ 0.94
DDX54-208ENST00000551344 SMC1AQ14683 1233 aaKnown RBP20.91■□□□□ 0.94
DDX54-208ENST00000551344 ATG2AQ2TAZ0 1938 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 NT5DC1Q5TFE4 455 aa20.91■□□□□ 0.94
DDX54-208ENST00000551344 APBB1IPQ7Z5R6 666 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms