RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SPATA33Q96N06 139 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 GPR20Q99678 358 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 TARS2Q9BW92 718 aaKnown RBP22.72■■□□□ 1.23
PRDM4-205ENST00000550376 ANKFY1Q9P2R3 1169 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 BZW2Q9Y6E2 419 aaKnown RBP22.72■■□□□ 1.23
PRDM4-205ENST00000550376 CALCAP01258 141 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 FERP16591 822 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 MATR3P43243 847 aaKnown RBP eCLIP22.72■■□□□ 1.23
PRDM4-205ENST00000550376 RNASE9P60153 205 aaKnown RBP22.72■■□□□ 1.23
PRDM4-205ENST00000550376 TUBB2AQ13885 445 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 CREG2Q8IUH2 290 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 PPM1KQ8N3J5 372 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 DEPTORQ8TB45 409 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 TUBB2BQ9BVA1 445 aa22.72■■□□□ 1.23
PRDM4-205ENST00000550376 BTBD19C9JJ37 291 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 TXNP10599 105 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 ABCB4P21439 1286 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 C2orf54Q08AI8 447 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 OSBPL9Q96SU4 736 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 NIFKQ9BYG3 293 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 AZI2Q9H6S1 392 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 ANO9A1A5B4 782 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 K7ERI5 159 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 ZMYND10O75800 440 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 SRGAP2CP0DJJ0 459 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 TGFB3P10600 412 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 ARL2P36404 184 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 NLRP11P59045 1033 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 CELF3Q5SZQ8 465 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 DHX37Q8IY37 1157 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 SLC17A8Q8NDX2 589 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 PRPF31Q8WWY3 499 aaKnown RBP22.71■■□□□ 1.23
PRDM4-205ENST00000550376 MS4A4AQ96JQ5 239 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 NRBP2Q9NSY0 501 aa22.71■■□□□ 1.23
PRDM4-205ENST00000550376 CETN1Q12798 172 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 TARBP2Q15633 366 aaKnown RBP22.7■■□□□ 1.22
PRDM4-205ENST00000550376 BRDTQ58F21 947 aaPredicted RBP22.7■■□□□ 1.22
PRDM4-205ENST00000550376 SCARA3Q6AZY7 606 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 PNMA8AQ86V59 439 aaPredicted RBP22.7■■□□□ 1.22
PRDM4-205ENST00000550376 CHORDC1Q9UHD1 332 aaPredicted RBP22.7■■□□□ 1.22
PRDM4-205ENST00000550376 CCL15-CCL14A0A0B4J2E2 113 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 GRID2IPA4D2P6 1211 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 CYP24A1Q07973 514 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 CCL15Q16663 113 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 GPD1LQ8N335 351 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 KREMEN1Q96MU8 473 aa22.7■■□□□ 1.22
PRDM4-205ENST00000550376 LUC7LQ9NQ29 371 aaKnown RBP22.7■■□□□ 1.22
PRDM4-205ENST00000550376 ARID2Q68CP9 1835 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 STRN3Q13033 797 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 CAPSQ13938 189 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 KCTD19Q17RG1 926 aaPredicted RBP22.69■■□□□ 1.22
PRDM4-205ENST00000550376 TAF3Q5VWG9 929 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 SV2AQ7L0J3 742 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 TMEM174Q8WUU8 243 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 BRI3BPQ8WY22 251 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 ZNF516Q92618 1163 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 DHX38Q92620 1227 aaKnown RBP22.69■■□□□ 1.22
PRDM4-205ENST00000550376 TATDN2Q93075 761 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 RTP1P59025 263 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 MKRN4PQ13434 485 aaPredicted RBP22.69■■□□□ 1.22
PRDM4-205ENST00000550376 FAM160B1Q5W0V3 765 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 TMCO3Q6UWJ1 677 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 RNF10Q8N5U6 811 aaKnown RBP22.69■■□□□ 1.22
PRDM4-205ENST00000550376 GPRC5AQ8NFJ5 357 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 MAF1Q9H063 256 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 MROH8Q9H579 483 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 RRAGCQ9HB90 399 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 PDE11AQ9HCR9 933 aa22.69■■□□□ 1.22
PRDM4-205ENST00000550376 GALCP54803 685 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 SLC30A5Q8TAD4 765 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 MFSD14AQ96MC6 490 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 HYOU1Q9Y4L1 999 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 SGPL1O95470 568 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 ADORA2AP29274 412 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 VSNL1P62760 191 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 KRT39Q6A163 491 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 CCDC62Q6P9F0 684 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 ARMCX2Q7L311 632 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 VPS36Q86VN1 386 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 HVCN1Q96D96 273 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 FBXL18Q96ME1 805 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 OSGEPQ9NPF4 335 aa22.68■■□□□ 1.22
PRDM4-205ENST00000550376 ZBTB42B2RXF5 422 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 CYP26A1O43174 497 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 SNRPFP62306 86 aaKnown RBP22.67■■□□□ 1.22
PRDM4-205ENST00000550376 BMS1Q14692 1282 aaKnown RBP22.67■■□□□ 1.22
PRDM4-205ENST00000550376 PPP1R16BQ96T49 567 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 PLEKHA4Q9H4M7 779 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 ARGLU1Q9NWB6 273 aaPredicted RBP22.67■■□□□ 1.22
PRDM4-205ENST00000550376 PTPRJQ12913 1337 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 H2AFZP0C0S5 128 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 TNFAIP3P21580 790 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 IGBP1P78318 339 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 CC2D1AQ6P1N0 951 aaPredicted RBP22.67■■□□□ 1.22
PRDM4-205ENST00000550376 H2AFVQ71UI9 128 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 ZBTB33Q86T24 672 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 AGO2Q9UKV8 859 aaKnown RBP22.67■■□□□ 1.22
PRDM4-205ENST00000550376 NENFQ9UMX5 172 aa22.67■■□□□ 1.22
PRDM4-205ENST00000550376 ZNF233A6NK53 670 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms