RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 GUCY1B3Q02153 619 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 MBTD1Q05BQ5 628 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 CAPSQ13938 189 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 RABEP1Q15276 862 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ATAT1Q5SQI0 421 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 LLGL2Q6P1M3 1020 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ZNF280BQ86YH2 543 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ZBTB8OSQ8IWT0 167 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 SMG8Q8ND04 991 aaKnown RBP12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ASAP3Q8TDY4 903 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 EDAQ92838 391 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 COLEC11Q9BWP8 271 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 GBP3Q9H0R5 595 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 POLR3FQ9H1D9 316 aaPredicted RBP12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 PRMT7Q9NVM4 692 aaPredicted RBP12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 MUTYHQ9UIF7 546 aa12.06□□□□□ -0.48
VTI1BP3-201ENST00000550220 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 ARL5CA6NH57 179 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 MEIS3P2A8K0S8 358 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 DDHD2O94830 711 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 C1RP00736 705 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 POMCP01189 267 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 ARF4P18085 180 aaPredicted RBP12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 CYP11B2P19099 503 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 FAM187BQ17R55 369 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 PADI6Q6TGC4 694 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 APBB1IPQ7Z5R6 666 aaPredicted RBP12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 BMP8AQ7Z5Y6 402 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 MRPL17Q9NRX2 175 aaKnown RBP12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 DNAJB4Q9UDY4 337 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 KCNG1Q9UIX4 513 aa12.05□□□□□ -0.48
VTI1BP3-201ENST00000550220 LRRIQ4A6NIV6 560 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 WNT7AO00755 349 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 NRP1O14786 923 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 MED24O75448 989 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 SOD2P04179 222 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 KLRC2P26717 231 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 MCM2P49736 904 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 EFNA5P52803 228 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 MAPK6Q16659 721 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 AMHR2Q16671 573 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 CDCA2Q69YH5 1023 aaPredicted RBP12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 CABP7Q86V35 215 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 COLGALT2Q8IYK4 626 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 GPR65Q8IYL9 337 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 KIFAP3Q92845 792 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 CPB2Q96IY4 423 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 GAD1Q99259 594 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 KIF2CQ99661 725 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 EIF2AQ9BY44 585 aaKnown RBP12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 FZD8Q9H461 694 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
VTI1BP3-201ENST00000550220 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 N4BP3O15049 544 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 URODP06132 367 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 NAMPTP43490 491 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 OR1G1P47890 313 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 ZXDAP98168 799 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 CREMQ03060 361 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 DSC1Q08554 894 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 PRPF4BQ13523 1007 aaKnown RBP12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 RILPL1Q5EBL4 403 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 KIAA1841Q6NSI8 718 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 CYP26C1Q6V0L0 522 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 MAEAQ7L5Y9 396 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 DEPTORQ8TB45 409 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 SLC22A17Q8WUG5 538 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 KLHL5Q96PQ7 755 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 RPS6KC1Q96S38 1066 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 SFXN1Q9H9B4 322 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 RAPGEFL1Q9UHV5 662 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
VTI1BP3-201ENST00000550220 ACKR2O00590 384 aa12.02□□□□□ -0.49
VTI1BP3-201ENST00000550220 LILRB3O75022 631 aa12.02□□□□□ -0.49
VTI1BP3-201ENST00000550220 NPTXRO95502 500 aa12.02□□□□□ -0.49
VTI1BP3-201ENST00000550220 ADH1AP07327 375 aa12.02□□□□□ -0.49
VTI1BP3-201ENST00000550220 MLH1P40692 756 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms