RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 PARVGQ9HBI0 331 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 INPP5FQ9Y2H2 1132 aa28.57■■■□□ 2.16
CPSF6-205ENST00000550075 NPHP3-ACAD11A0A0J9YXS1 232 aa28.56■■■□□ 2.16
CPSF6-205ENST00000550075 NUCB2P80303 420 aa28.56■■■□□ 2.16
CPSF6-205ENST00000550075 CACNB1Q02641 598 aaPredicted RBP28.56■■■□□ 2.16
CPSF6-205ENST00000550075 PRRC2BQ5JSZ5 2229 aaKnown RBP28.56■■■□□ 2.16
CPSF6-205ENST00000550075 NTPCRQ9BSD7 190 aaKnown RBP28.56■■■□□ 2.16
CPSF6-205ENST00000550075 ZMYM2Q9UBW7 1377 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 SLC16A4O15374 487 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 PPM1AP35813 382 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 STRN3Q13033 797 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 DCAF4L1Q3SXM0 396 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 AGMOQ6ZNB7 445 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 COLGALT1Q8NBJ5 622 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 SMG8Q8ND04 991 aaKnown RBP28.55■■■□□ 2.16
CPSF6-205ENST00000550075 MRPL38Q96DV4 380 aaKnown RBP28.55■■■□□ 2.16
CPSF6-205ENST00000550075 SPATA32Q96LK8 384 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 ZNF558Q96NG5 402 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 MRPL4Q9BYD3 311 aaKnown RBP28.55■■■□□ 2.16
CPSF6-205ENST00000550075 CUEDC2Q9H467 287 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 PDZD7Q9H5P4 517 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 CWH43Q9H720 699 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 FAM13BQ9NYF5 915 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 RCOR1Q9UKL0 485 aa28.55■■■□□ 2.16
CPSF6-205ENST00000550075 ZNF131P52739 623 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 RNASELQ05823 741 aaKnown RBP28.54■■■□□ 2.16
CPSF6-205ENST00000550075 GIT2Q14161 759 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 TIGD5Q53EQ6 642 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 ATF7IP2Q5U623 682 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 CDR2LQ86X02 465 aaPredicted RBP28.54■■■□□ 2.16
CPSF6-205ENST00000550075 THNSL1Q8IYQ7 743 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 MYCT1Q8N699 235 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 PDILTQ8N807 584 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 NXF3Q9H4D5 531 aaKnown RBP28.54■■■□□ 2.16
CPSF6-205ENST00000550075 ZHX3Q9H4I2 956 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 KANSL3Q9P2N6 904 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 PCDHA7Q9UN72 937 aa28.54■■■□□ 2.16
CPSF6-205ENST00000550075 MEIS3P2A8K0S8 358 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 OFD1O75665 1012 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 ABCD1P33897 745 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 AXDND1Q5T1B0 1012 aaPredicted RBP28.53■■■□□ 2.16
CPSF6-205ENST00000550075 SHC4Q6S5L8 630 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 TMEM161BQ8NDZ6 487 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 PPM1EQ8WY54 764 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 APOL6Q9BWW8 343 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 PANK2Q9BZ23 570 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 LRRC27Q9C0I9 530 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 HCSTQ9UBK5 93 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 GIT1Q9Y2X7 761 aa28.53■■■□□ 2.16
CPSF6-205ENST00000550075 NCKAP1LP55160 1127 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 LRRC55Q6ZSA7 311 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 KLHL23Q8NBE8 558 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 SLC17A8Q8NDX2 589 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 PYM1Q9BRP8 204 aaKnown RBP28.52■■■□□ 2.16
CPSF6-205ENST00000550075 SCAND2PQ9GZW5 306 aaPredicted RBP28.52■■■□□ 2.16
CPSF6-205ENST00000550075 TBC1D13Q9NVG8 400 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 TNFSF13BQ9Y275 285 aa28.52■■■□□ 2.16
CPSF6-205ENST00000550075 A0A087X0B3 334 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 K7ENM7 598 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 EDN1P05305 212 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 UBE3AQ05086 875 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 CCDC85BQ15834 202 aaPredicted RBP28.51■■■□□ 2.15
CPSF6-205ENST00000550075 NT5DC1Q5TFE4 455 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 KCNT2Q6UVM3 1135 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 IQUBQ8NA54 791 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 LEO1Q8WVC0 666 aaPredicted RBP28.51■■■□□ 2.15
CPSF6-205ENST00000550075 PLAGL2Q9UPG8 496 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 HES2Q9Y543 173 aa28.51■■■□□ 2.15
CPSF6-205ENST00000550075 TTLL13PA6NNM8 815 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 GRM6O15303 877 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 ITGB1P05556 798 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 MAPTP10636 758 aaKnown RBP28.5■■■□□ 2.15
CPSF6-205ENST00000550075 ALDH7A1P49419 539 aaKnown RBP28.5■■■□□ 2.15
CPSF6-205ENST00000550075 RESP18Q5W5W9 173 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 DYMQ7RTS9 669 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 FAM178BQ8IXR5 827 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 DDX12PQ92771 950 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 FAM193BQ96PV7 902 aaPredicted RBP28.5■■■□□ 2.15
CPSF6-205ENST00000550075 ACO2Q99798 780 aaKnown RBP28.5■■■□□ 2.15
CPSF6-205ENST00000550075 TNMDQ9H2S6 317 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 MAGEF1Q9HAY2 307 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 ALG13Q9NP73 1137 aaKnown RBP28.5■■■□□ 2.15
CPSF6-205ENST00000550075 SEL1LQ9UBV2 794 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 PARP2Q9UGN5 583 aa28.5■■■□□ 2.15
CPSF6-205ENST00000550075 INPPL1O15357 1258 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 TRAK2O60296 914 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 ZC3H11AO75152 810 aaKnown RBP eCLIP28.49■■■□□ 2.15
CPSF6-205ENST00000550075 FGF18O76093 207 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 GAP43P17677 238 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 ANP32AP39687 249 aaKnown RBP28.49■■■□□ 2.15
CPSF6-205ENST00000550075 MLH1P40692 756 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 ZNF568Q3ZCX4 644 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 EEF1DP3Q658K8 133 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 TAS1R3Q7RTX0 852 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 HAUS6Q7Z4H7 955 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 KCNN1Q92952 543 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 DHX58Q96C10 678 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 RPS6KC1Q96S38 1066 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 SPG21Q9NZD8 308 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 USP20Q9Y2K6 914 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms