RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 APOL3O95236 402 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 APOBEC3AP31941 199 aaPredicted RBP6.12□□□□□ -1.43
CCDC38-208ENST00000549876 NEK4P51957 841 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 STRIP1Q5VSL9 837 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 DOK3Q7L591 496 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 PRDM13Q9H4Q3 707 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 SYBUQ9NX95 663 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 CHST2Q9Y4C5 530 aa6.12□□□□□ -1.43
CCDC38-208ENST00000549876 ELL2O00472 640 aaPredicted RBP6.11□□□□□ -1.43
CCDC38-208ENST00000549876 CASRP41180 1078 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 WNT3AP56704 352 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 CD69Q07108 199 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 CSRP2Q16527 193 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 CNNM4Q6P4Q7 775 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 ARHGEF19Q8IW93 802 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 DHX37Q8IY37 1157 aaKnown RBP6.11□□□□□ -1.43
CCDC38-208ENST00000549876 ZZZ3Q8IYH5 903 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 EFHBQ8N7U6 833 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 OR5M3Q8NGP4 307 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 WDR11Q9BZH6 1224 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 ADARB2Q9NS39 739 aaKnown RBP6.11□□□□□ -1.43
CCDC38-208ENST00000549876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.11□□□□□ -1.43
CCDC38-208ENST00000549876 ANKFY1Q9P2R3 1169 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 MRPL42Q9Y6G3 142 aaKnown RBP6.11□□□□□ -1.43
CCDC38-208ENST00000549876 COX11Q9Y6N1 276 aa6.11□□□□□ -1.43
CCDC38-208ENST00000549876 MYPNQ86TC9 1320 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 GAS7O60861 476 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 LY86O95711 162 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 ATXN1P54253 815 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 LRRC32Q14392 662 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 SEPT7Q16181 437 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 GDF7Q7Z4P5 450 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 JAZF1Q86VZ6 243 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 IL17RAQ96F46 866 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 DCLRE1CQ96SD1 692 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 TARS2Q9BW92 718 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 THG1LQ9NWX6 298 aaKnown RBP6.1□□□□□ -1.43
CCDC38-208ENST00000549876 TRPM5Q9NZQ8 1165 aa6.1□□□□□ -1.43
CCDC38-208ENST00000549876 SEC24DO94855 1032 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-208ENST00000549876 ZNF37AP17032 561 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-208ENST00000549876 TYRP1P17643 537 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 USP14P54578 494 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 ZKSCAN2Q63HK3 967 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 CCDC62Q6P9F0 684 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 SMC1BQ8NDV3 1235 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 ZNF496Q96IT1 587 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-208ENST00000549876 EPC1Q9H2F5 836 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 R3HDMLQ9H3Y0 253 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 AKIP1Q9NQ31 210 aa6.09□□□□□ -1.43
CCDC38-208ENST00000549876 EPN1Q9Y6I3 576 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-208ENST00000549876 GAGE12BA1L429 117 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 GAGE12HA6NDE8 117 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 LEFTY2O00292 366 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 RNASET2O00584 256 aaKnown RBP6.08□□□□□ -1.44
CCDC38-208ENST00000549876 NCR1O76036 304 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 PCDH8O95206 1070 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 CD40P25942 277 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 CD38P28907 300 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 GZMKP49863 264 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 BEAN1Q3B7T3 259 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 TAS1R1Q7RTX1 841 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 SUPT20HQ8NEM7 779 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 NAF1Q96HR8 494 aaKnown RBP6.08□□□□□ -1.44
CCDC38-208ENST00000549876 FDXACB1Q9BRP7 624 aaPredicted RBP6.08□□□□□ -1.44
CCDC38-208ENST00000549876 PCDHB6Q9Y5E3 794 aa6.08□□□□□ -1.44
CCDC38-208ENST00000549876 LCHNA4D1U4 455 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 CDC45O75419 566 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 BMPR1AP36894 532 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 KPNA1P52294 538 aaPredicted RBP6.07□□□□□ -1.44
CCDC38-208ENST00000549876 KRTAP10-11P60412 298 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 ZBTB41Q5SVQ8 909 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 GPR158Q5T848 1215 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 KIAA0907Q7Z7F0 614 aaPredicted RBP6.07□□□□□ -1.44
CCDC38-208ENST00000549876 MSL3Q8N5Y2 521 aaKnown RBP6.07□□□□□ -1.44
CCDC38-208ENST00000549876 CDYL2Q8N8U2 506 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 COQ10AQ96MF6 247 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 FEZ1Q99689 392 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 SPTLC3Q9NUV7 552 aa6.07□□□□□ -1.44
CCDC38-208ENST00000549876 PFKMP08237 780 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 ZSCAN20P17040 1043 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-208ENST00000549876 BTNL9Q6UXG8 535 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 RD3Q7Z3Z2 195 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 XYLT1Q86Y38 959 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 SYT12Q8IV01 421 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 PASD1Q8IV76 773 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 PPM1KQ8N3J5 372 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 LCORLQ8N3X6 602 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 GPR101Q96P66 508 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-208ENST00000549876 MS4A5Q9H3V2 200 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 USP36Q9P275 1121 aaKnown RBP6.06□□□□□ -1.44
CCDC38-208ENST00000549876 MSRAQ9UJ68 235 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 HDAC5Q9UQL6 1122 aa6.06□□□□□ -1.44
CCDC38-208ENST00000549876 A0A087X0B3 334 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 A0A1W2PR48 441 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 INO80B-WBP1J3KQ70 363 aa6.05□□□□□ -1.44
CCDC38-208ENST00000549876 ZNF185O15231 689 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms