RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 SH3GLB2Q9NR46 395 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 NRBP2Q9NSY0 501 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 AKT3Q9Y243 479 aa13.69□□□□□ -0.22
DDX54-206ENST00000549271 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
DDX54-206ENST00000549271 RALGAPA1Q6GYQ0 2036 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 MSH4O15457 936 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 ZNF862O60290 1169 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 RFPL2O75678 378 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 OATP04181 439 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDX54-206ENST00000549271 SFNP31947 248 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 MAGEA9P43362 315 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 GPC5P78333 572 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 STK3Q13188 491 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 RDM1Q8NG50 284 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 NETO1Q8TDF5 533 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 SLC5A5Q92911 643 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 ZNF668Q96K58 619 aaPredicted RBP13.68□□□□□ -0.22
DDX54-206ENST00000549271 CHST12Q9NRB3 414 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
DDX54-206ENST00000549271 TEX28O15482 410 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 OFD1O75665 1012 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 JAK3P52333 1124 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 PRKCQQ04759 706 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 TARBP2Q15633 366 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 ELMSAN1Q6PJG2 1045 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 GLB1LQ6UWU2 654 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 ZNF280BQ86YH2 543 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 FAM177A1Q8N128 213 aaPredicted RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 LRRC71Q8N4P6 559 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 GMEB2Q9UKD1 530 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.67□□□□□ -0.22
DDX54-206ENST00000549271 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
DDX54-206ENST00000549271 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 FAM170BA6NMN3 283 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 ZNF623O75123 536 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 EFEMP2O95967 443 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 GLUD1P00367 558 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 SOD2P04179 222 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 ADH1AP07327 375 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 CYP3A7P24462 503 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 PRKCEQ02156 737 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 SCRN1Q12765 414 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 LONRF3Q496Y0 759 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 Q4G0T1 1027 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 GET4Q7L5D6 327 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 ST13P5Q8NFI4 369 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 FGF14Q92915 247 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 CLDN23Q96B33 292 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 NIFKQ9BYG3 293 aaKnown RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 RXFP1Q9HBX9 757 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 PRMT8Q9NR22 394 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
DDX54-206ENST00000549271 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
DDX54-206ENST00000549271 C2CD2LO14523 706 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 CPLX1O14810 134 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 PFKFB2O60825 505 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 GAS7O60861 476 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 CSDE1O75534 798 aaKnown RBP13.65□□□□□ -0.22
DDX54-206ENST00000549271 PSMD10O75832 226 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 DDHD2O94830 711 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 C1RP00736 705 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 URODP06132 367 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 SKIP12755 728 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
DDX54-206ENST00000549271 AK2P54819 239 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 ACAP1Q15027 740 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 NPY5RQ15761 445 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 UGCGQ16739 394 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 TSSK4Q6SA08 328 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 PARM1Q6UWI2 310 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 TRMT1LQ7Z2T5 733 aaKnown RBP13.65□□□□□ -0.22
DDX54-206ENST00000549271 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms