RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 C2orf71A6NGG8 1288 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 CLASP2O75122 1294 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 DGAT1O75907 488 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 ASGR2P07307 311 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 PPM1AP35813 382 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 CCT6AP40227 531 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 CLCN5P51795 746 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 TMC7Q7Z402 723 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 PIGOQ8TEQ8 1089 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 TCP11Q8WWU5 503 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 ZNF558Q96NG5 402 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 OSMRQ99650 979 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 SPTBN2O15020 2390 aa17.46■□□□□ 0.39
CHMP1A-206ENST00000549139 GPR179Q6PRD1 2367 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 A0A087WWV3 80 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 ASAP2O43150 1006 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 MTHFRP42898 656 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 ID4P47928 161 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 EMC2Q15006 297 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 CWF19L1Q69YN2 538 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 ADSSL1Q8N142 457 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 SLC39A11Q8N1S5 342 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 PPP1R16BQ96T49 567 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 MTRQ99707 1265 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 SPG21Q9NZD8 308 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 LIMD1Q9UGP4 676 aa17.45■□□□□ 0.38
CHMP1A-206ENST00000549139 VWA3AA6NCI4 1184 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 HOXA2O43364 376 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 WEE2P0C1S8 567 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 KRT17Q04695 432 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 SMC1AQ14683 1233 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 PTPAQ15257 358 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 ECM1Q16610 540 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 POTEGQ6S5H5 508 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 PSPC1Q8WXF1 523 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 AK8Q96MA6 479 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 CCDC43Q96MW1 224 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 MMTAG2Q9BU76 263 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 XPNPEP1Q9NQW7 623 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 MYH11P35749 1972 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 DENND4AQ7Z401 1863 aa17.44■□□□□ 0.38
CHMP1A-206ENST00000549139 PP2D1A8MPX8 630 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 DARSP14868 501 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 NPR3P17342 541 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 CDC25AP30304 524 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 BECN1Q14457 450 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 HYIQ5T013 277 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 KIAA1841Q6NSI8 718 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 C12orf76Q8N812 135 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 PRPF31Q8WWY3 499 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 TMEM143Q96AN5 459 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 GCOM2Q9BZD3 368 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 INO80BQ9C086 356 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 MORC2Q9Y6X9 1032 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-206ENST00000549139 FRYLO94915 3013 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 ACACBO00763 2458 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 A0A087WZ62 844 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 SLC26A4O43511 780 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 PI15O43692 258 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 LONP1P36776 959 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 MXD4Q14582 209 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 RARS2Q5T160 578 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 KANK3Q6NY19 840 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 ZNF598Q86UK7 904 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 ECHDC2Q86YB7 292 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 TDRD5Q8NAT2 981 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 FEZF2Q8TBJ5 459 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 ZNF668Q96K58 619 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 FDXACB1Q9BRP7 624 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 BMP2KQ9NSY1 1161 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 DNM3Q9UQ16 869 aa17.42■□□□□ 0.38
CHMP1A-206ENST00000549139 TCHHQ07283 1943 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 EOMESO95936 686 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 F13A1P00488 732 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 AOC1P19801 751 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 ARL2P36404 184 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 POU5F1BQ06416 359 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 LAMTOR4Q0VGL1 99 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 KSR1Q8IVT5 923 aa17.41■□□□□ 0.38
CHMP1A-206ENST00000549139 CCDC105Q8IYK2 499 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms