RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
CNOT2-216ENST00000548939 TNFRSF18Q9Y5U5 241 aa5.89□□□□□ -1.47
CNOT2-216ENST00000548939 COL4A3Q01955 1670 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 ZAR1LA6NP61 321 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 TGM5O43548 720 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 LPXNO60711 386 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 HSP90B1P14625 803 aaKnown RBP5.88□□□□□ -1.47
CNOT2-216ENST00000548939 FBLP22087 321 aaKnown RBP5.88□□□□□ -1.47
CNOT2-216ENST00000548939 GPR15P49685 360 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 KPNA1P52294 538 aaPredicted RBP5.88□□□□□ -1.47
CNOT2-216ENST00000548939 NRG3P56975 720 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 TAP1Q03518 808 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 GDF7Q7Z4P5 450 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 MSL3Q8N5Y2 521 aaKnown RBP5.88□□□□□ -1.47
CNOT2-216ENST00000548939 DCLRE1CQ96SD1 692 aaKnown RBP5.88□□□□□ -1.47
CNOT2-216ENST00000548939 ANKFY1Q9P2R3 1169 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 CLCA2Q9UQC9 943 aa5.88□□□□□ -1.47
CNOT2-216ENST00000548939 RNASET2O00584 256 aaKnown RBP5.87□□□□□ -1.47
CNOT2-216ENST00000548939 POU3F2P20265 443 aaPredicted RBP5.87□□□□□ -1.47
CNOT2-216ENST00000548939 USP14P54578 494 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 MGAT5Q09328 741 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 TCEA2Q15560 299 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 CCDC142Q17RM4 750 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 CCDC178Q5BJE1 867 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 GPR158Q5T848 1215 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 LILRA3Q8N6C8 439 aaPredicted RBP5.87□□□□□ -1.47
CNOT2-216ENST00000548939 MTFR1LQ9H019 292 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 SERHL2Q9H4I8 314 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 AKIP1Q9NQ31 210 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 PTGFRNQ9P2B2 879 aa5.87□□□□□ -1.47
CNOT2-216ENST00000548939 A0A1W2PR48 441 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 PRSS38A1L453 326 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 TMEM200CA6NKL6 621 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 LEFTY2O00292 366 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 NCR1O76036 304 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 ZEB1P37275 1124 aaPredicted RBP5.86□□□□□ -1.47
CNOT2-216ENST00000548939 C21orf62-AS1Q17RA5 79 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 STRIP1Q5VSL9 837 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 OLFML1Q6UWY5 402 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 Q6YL49 198 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 LRRTM3Q86VH5 581 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 SUPT20HQ8NEM7 779 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 SREK1Q8WXA9 508 aaKnown RBP5.86□□□□□ -1.47
CNOT2-216ENST00000548939 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 CD2APQ9Y5K6 639 aa5.86□□□□□ -1.47
CNOT2-216ENST00000548939 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 LCHNA4D1U4 455 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 NDUFA10O95299 355 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 LSP1P33241 339 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 RNASE9P60153 205 aaKnown RBP5.85□□□□□ -1.47
CNOT2-216ENST00000548939 MRPS21P82921 87 aaKnown RBP5.85□□□□□ -1.47
CNOT2-216ENST00000548939 PPARAQ07869 468 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 SART3Q15020 963 aaKnown RBP5.85□□□□□ -1.47
CNOT2-216ENST00000548939 UBE3CQ15386 1083 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 CNNM4Q6P4Q7 775 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 GPRIN1Q7Z2K8 1008 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 GLB1L2Q8IW92 636 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 LCORLQ8N3X6 602 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 ZNF610Q8N9Z0 462 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 SMC1BQ8NDV3 1235 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 ZNF764Q96H86 408 aaPredicted RBP5.85□□□□□ -1.47
CNOT2-216ENST00000548939 GPR101Q96P66 508 aaPredicted RBP5.85□□□□□ -1.47
CNOT2-216ENST00000548939 CHST2Q9Y4C5 530 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 NUMBLQ9Y6R0 609 aa5.85□□□□□ -1.47
CNOT2-216ENST00000548939 PCSK5Q92824 1860 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 FAM83GA6ND36 823 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 KIAA0355O15063 1070 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 LTA4HP09960 611 aaKnown RBP5.84□□□□□ -1.47
CNOT2-216ENST00000548939 PHC1P78364 1004 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 OCRLQ01968 901 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 APBA1Q02410 837 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 NHLH2Q02577 135 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 ADGRG3Q86Y34 549 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 PLXDC1Q8IUK5 500 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 ARHGEF19Q8IW93 802 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 CDC5LQ99459 802 aaKnown RBP5.84□□□□□ -1.47
CNOT2-216ENST00000548939 MS4A5Q9H3V2 200 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 SYNPO2LQ9H987 977 aa5.84□□□□□ -1.47
CNOT2-216ENST00000548939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
CNOT2-216ENST00000548939 DIRC3C9JPN6 131 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 PRAMEF4O60810 478 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 CLEC2LP0C7M8 214 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 ZSCAN20P17040 1043 aaPredicted RBP5.83□□□□□ -1.48
CNOT2-216ENST00000548939 LMO1P25800 156 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 IL12RB1P42701 662 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 AVPR1BP47901 424 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 SCNN1BP51168 640 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 PCBP1Q15365 356 aaKnown RBP eCLIP5.83□□□□□ -1.48
CNOT2-216ENST00000548939 TERF2Q15554 542 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 CCDC62Q6P9F0 684 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 DRICH1Q6PGQ1 229 aaPredicted RBP5.83□□□□□ -1.48
CNOT2-216ENST00000548939 HOMER1Q86YM7 354 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 CMTR2Q8IYT2 770 aaKnown RBP5.83□□□□□ -1.48
CNOT2-216ENST00000548939 OR10H5Q8NGA6 315 aa5.83□□□□□ -1.48
CNOT2-216ENST00000548939 RSAD2Q8WXG1 361 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms