RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CCDC113Q9H0I3 377 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 FZD8Q9H461 694 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 PDZD7Q9H5P4 517 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
DDX54-205ENST00000548786 DNAJB4Q9UDY4 337 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 CUL9Q8IWT3 2517 aa17.41■□□□□ 0.38
DDX54-205ENST00000548786 DLL1O00548 723 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 SLC16A4O15374 487 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 CA8P35219 290 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 ALDH7A1P49419 539 aaKnown RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 ERVFC1P60507 584 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 HYAL1Q12794 435 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 MCM6Q14566 821 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 PLPP4Q5VZY2 271 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 EEF1DP3Q658K8 133 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 TMEM173Q86WV6 379 aaPredicted RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 GAD1Q99259 594 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 KMT5AQ9NQR1 393 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 ENTPD7Q9NQZ7 604 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 TLR9Q9NR96 1032 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 CLDND1Q9NY35 253 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 SPG21Q9NZD8 308 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
DDX54-205ENST00000548786 PARP2Q9UGN5 583 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 COG5Q9UP83 839 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 MYH15Q9Y2K3 1946 aa17.4■□□□□ 0.38
DDX54-205ENST00000548786 A0A1B0GUA9 196 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 ARL5CA6NH57 179 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 H3BQ06 376 aaPredicted RBP17.39■□□□□ 0.37
DDX54-205ENST00000548786 LINC01565O15544 149 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 DDHD2O94830 711 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 ZSCAN22P10073 491 aaPredicted RBP17.39■□□□□ 0.37
DDX54-205ENST00000548786 GUCY2CP25092 1073 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 SCNN1GP51170 649 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 STK38Q15208 465 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 CLUL1Q15846 466 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 SLC39A11Q8N1S5 342 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 CNNM3Q8NE01 707 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 BCL7CQ8WUZ0 217 aaPredicted RBP17.39■□□□□ 0.37
DDX54-205ENST00000548786 PRIMPOLQ96LW4 560 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 TCF25Q9BQ70 676 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
DDX54-205ENST00000548786 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
DDX54-205ENST00000548786 K7ERI5 159 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 ACKR2O00590 384 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 N4BP3O15049 544 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 PER2O15055 1255 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
DDX54-205ENST00000548786 PPM1AP35813 382 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 NRIP1P48552 1158 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 SLC11A1P49279 550 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 EFNA5P52803 228 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 KRT17Q04695 432 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 SLC39A14Q15043 492 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 FAM187BQ17R55 369 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 ARSHQ5FYA8 562 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 ATF7IP2Q5U623 682 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 HACE1Q8IYU2 909 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 MRPS27Q92552 414 aaKnown RBP17.38■□□□□ 0.37
DDX54-205ENST00000548786 RAD54LQ92698 747 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 FAM193BQ96PV7 902 aaPredicted RBP17.38■□□□□ 0.37
DDX54-205ENST00000548786 REEP2Q9BRK0 252 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 PANK2Q9BZ23 570 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
DDX54-205ENST00000548786 TCF20Q9UGU0 1960 aaKnown RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 F13A1P00488 732 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 GALTP07902 379 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 PLS3P13797 630 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 AAK1Q2M2I8 961 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 TAS1R3Q7RTX0 852 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 TMEM169Q96HH4 297 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 ZNF396Q96N95 335 aaPredicted RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 NECAB3Q96P71 396 aaPredicted RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 UBN1Q9NPG3 1134 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 MIOSQ9NXC5 875 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 SNTG2Q9NY99 539 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
DDX54-205ENST00000548786 PHLPP2Q6ZVD8 1323 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 MYH11P35749 1972 aa17.37■□□□□ 0.37
DDX54-205ENST00000548786 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 TXLNAP40222 546 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 PLCB3Q01970 1234 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 UBE3AQ05086 875 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms