RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 IPPQ9Y573 584 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 IRAK3Q9Y616 596 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 ATG2AQ2TAZ0 1938 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 MEIS3P2A8K0S8 358 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 NT5C1B-RDH14C9J2C7 533 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 INPPL1O15357 1258 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 CXCL14O95715 111 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 GLP2RO95838 553 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 GJB2P29033 226 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 NAMPTP43490 491 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 EFNA5P52803 228 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 MAPK6Q16659 721 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 FAM187BQ17R55 369 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 CDCA2Q69YH5 1023 aaPredicted RBP12.6□□□□□ -0.39
BEST3-209ENST00000548658 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
BEST3-209ENST00000548658 KIFAP3Q92845 792 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 CASP10Q92851 521 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 IFT74Q96LB3 600 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 FZD8Q9H461 694 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 CD320Q9NPF0 282 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.6□□□□□ -0.39
BEST3-209ENST00000548658 BARX2Q9UMQ3 279 aaPredicted RBP12.6□□□□□ -0.39
BEST3-209ENST00000548658 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 SSX2IPQ9Y2D8 614 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 FAN1Q9Y2M0 1017 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 PCDHGC5Q9Y5F6 944 aa12.6□□□□□ -0.39
BEST3-209ENST00000548658 BDP1A6H8Y1 2624 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 C2orf71A6NGG8 1288 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 ARL5CA6NH57 179 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 HIDE1A8MVS5 230 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 POMCP01189 267 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 CTSAP10619 480 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 KCNC3Q14003 757 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 NBR1Q14596 966 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 AMHR2Q16671 573 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 TMEM31Q5JXX7 168 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
BEST3-209ENST00000548658 APBB1IPQ7Z5R6 666 aaPredicted RBP12.59□□□□□ -0.39
BEST3-209ENST00000548658 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 ZNF280BQ86YH2 543 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 DEPTORQ8TB45 409 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 SNX29Q8TEQ0 813 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 CPB2Q96IY4 423 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 ADPGKQ9BRR6 497 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
BEST3-209ENST00000548658 EPHX3Q9H6B9 360 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 GPRC5CQ9NQ84 441 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 DDX19AQ9NUU7 478 aaKnown RBP12.59□□□□□ -0.39
BEST3-209ENST00000548658 PHLPP2Q6ZVD8 1323 aa12.59□□□□□ -0.39
BEST3-209ENST00000548658 ACKR2O00590 384 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 N4BP3O15049 544 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 GPR37L1O60883 481 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 DDHD2O94830 711 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 CA8P35219 290 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 SLC11A1P49279 550 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 ITIH3Q06033 890 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 PRPF4BQ13523 1007 aaKnown RBP12.58□□□□□ -0.4
BEST3-209ENST00000548658 TMEM132AQ24JP5 1023 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 ARL6IP4Q66PJ3 421 aaKnown RBP12.58□□□□□ -0.4
BEST3-209ENST00000548658 CES5AQ6NT32 575 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 ANKRD54Q6NXT1 300 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 GAD1Q99259 594 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 NT5C3AQ9H0P0 336 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 ZBP1Q9H171 429 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
BEST3-209ENST00000548658 USP15Q9Y4E8 981 aaPredicted RBP12.58□□□□□ -0.4
BEST3-209ENST00000548658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 NRP1O14786 923 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 B4GALT5O43286 388 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 DCXO43602 365 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 BMP15O95972 392 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 PDCP20941 246 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 MLH1P40692 756 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 ATP2C1P98194 919 aaPredicted RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 CBX2Q14781 532 aaPredicted RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 COLGALT2Q8IYK4 626 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 VN1R2Q8NFZ6 395 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 SUSD6Q92537 303 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 AK8Q96MA6 479 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 DRC1Q96MC2 740 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 NECTIN4Q96NY8 510 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 TIPINQ9BVW5 301 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 COLEC11Q9BWP8 271 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 PHF7Q9BWX1 381 aaPredicted RBP12.57□□□□□ -0.4
BEST3-209ENST00000548658 EMILIN2Q9BXX0 1053 aa12.57□□□□□ -0.4
BEST3-209ENST00000548658 MRPL17Q9NRX2 175 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms