RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 HOXC13P31276 330 aa15.81■□□□□ 0.12
PTCH1-217ENST00000548420 NOVA1P51513 510 aaKnown RBP15.81■□□□□ 0.12
PTCH1-217ENST00000548420 ZNF252P-AS1Q0IIN9 211 aa15.81■□□□□ 0.12
PTCH1-217ENST00000548420 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
PTCH1-217ENST00000548420 FAM43BQ6ZT52 329 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-217ENST00000548420 TPRG1Q6ZUI0 275 aa15.81■□□□□ 0.12
PTCH1-217ENST00000548420 ZNF598Q86UK7 904 aaKnown RBP15.81■□□□□ 0.12
PTCH1-217ENST00000548420 RNF169Q8NCN4 708 aa15.81■□□□□ 0.12
PTCH1-217ENST00000548420 RNF26Q9BY78 433 aaPredicted RBP15.81■□□□□ 0.12
PTCH1-217ENST00000548420 CHURC1-FNTBB4DL54 471 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 B4GALT3O60512 393 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTCH1-217ENST00000548420 CAPNS1P04632 268 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 GALTP07902 379 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 ZNF806P0C7X5 589 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 FNTBP49356 437 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 CLK2P49760 499 aaKnown RBP15.8■□□□□ 0.12
PTCH1-217ENST00000548420 NAPAP54920 295 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
PTCH1-217ENST00000548420 UBE2SQ16763 222 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 NELL2Q99435 816 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 OSMRQ99650 979 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 EMILIN2Q9BXX0 1053 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 GLT8D2Q9H1C3 349 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 ARRDC1-AS1Q9H2J1 176 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 CHRDQ9H2X0 955 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 SMOC1Q9H4F8 434 aa15.8■□□□□ 0.12
PTCH1-217ENST00000548420 NCOA5Q9HCD5 579 aaKnown RBP15.8■□□□□ 0.12
PTCH1-217ENST00000548420 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 SMCO2A6NFE2 343 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 SPATA31D3P0C874 917 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 SATB1Q01826 763 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 KIZQ2M2Z5 673 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 PHKBQ93100 1093 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
PTCH1-217ENST00000548420 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 NT5C3AQ9H0P0 336 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 NRDE2Q9H7Z3 1164 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 PCDHA6Q9UN73 950 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 PCDHA8Q9Y5H6 950 aa15.79■□□□□ 0.12
PTCH1-217ENST00000548420 MTCL1Q9Y4B5 1905 aaKnown RBP15.78■□□□□ 0.12
PTCH1-217ENST00000548420 AXIN1O15169 862 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 NCAM2O15394 837 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-217ENST00000548420 KLRC1P26715 233 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 COL28A1Q2UY09 1125 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 C12orf50Q8NA57 414 aaPredicted RBP15.78■□□□□ 0.12
PTCH1-217ENST00000548420 DNAJB4Q9UDY4 337 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 UBIAD1Q9Y5Z9 338 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 SPAG17Q6Q759 2223 aa15.78■□□□□ 0.12
PTCH1-217ENST00000548420 SPDYE3A6NKU9 549 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 GPR32O75388 356 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 SLC11A1P49279 550 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 ADCY7P51828 1080 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 GAS6Q14393 721 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 ODR4Q5SWX8 454 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 HEBP1Q9NRV9 189 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.12
PTCH1-217ENST00000548420 HECTD1Q9ULT8 2610 aa15.77■□□□□ 0.11
PTCH1-217ENST00000548420 CELSR3Q9NYQ7 3312 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 TEX28O15482 410 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 PFKFB2O60825 505 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 ITGB5P18084 799 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 CRYBB1P53674 252 aaPredicted RBP15.76■□□□□ 0.11
PTCH1-217ENST00000548420 AK2P54819 239 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 AP3B2Q13367 1082 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 ANKRD1Q15327 319 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 CRYGNQ8WXF5 182 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 KXD1Q9BQD3 176 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 SLC26A6Q9BXS9 759 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 SH3GLB2Q9NR46 395 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
PTCH1-217ENST00000548420 A0A0U1RQF3 1178 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 C2CD2LO14523 706 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 MAFGO15525 162 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 SREBF1P36956 1147 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 NTHL1P78549 312 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 SSRP1Q08945 709 aaKnown RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 SCRN1Q12765 414 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 PLA2G2CQ5R387 149 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 ZNF852Q6ZMS4 543 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 TAS1R1Q7RTX1 841 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 PROSER1Q86XN7 944 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 FAM177A1Q8N128 213 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 CCDC12Q8WUD4 166 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 KIF2CQ99661 725 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 MRPL9Q9BYD2 267 aaKnown RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 PIDD1Q9HB75 910 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 JADE2Q9NQC1 790 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 CDH7Q9ULB5 785 aa15.75■□□□□ 0.11
PTCH1-217ENST00000548420 NDRG2Q9UN36 371 aaKnown RBP15.75■□□□□ 0.11
PTCH1-217ENST00000548420 MYO18BQ8IUG5 2567 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms