RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 CDC42BPBQ9Y5S2 1711 aa3.64□□□□□ -1.83
DEPDC4-204ENST00000547823 NHSL1Q5SYE7 1610 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 GAGE12BA1L429 117 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 GAGE12HA6NDE8 117 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 NR4A1P22736 598 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 MAN2A1Q16706 1144 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 LONRF2Q1L5Z9 754 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 C1QL3Q5VWW1 255 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 PAPD7Q5XG87 772 aaKnown RBP3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 CC2D1AQ6P1N0 951 aaPredicted RBP3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 Q6YL49 198 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 GLB1L3Q8NCI6 653 aaPredicted RBP3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 BEND2Q8NDZ0 799 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 SLC7A14Q8TBB6 771 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 PGBD4Q96DM1 585 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 SYNPO2LQ9H987 977 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 CLCA2Q9UQC9 943 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 PLXNC1O60486 1568 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 TNRQ92752 1358 aa3.63□□□□□ -1.83
DEPDC4-204ENST00000547823 KIF14Q15058 1648 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 FGD6Q6ZV73 1430 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 COL4A3Q01955 1670 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 FAM135AQ9P2D6 1515 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 RASSF10A6NK89 507 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 KCNK3O14649 394 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 KLF4O43474 513 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 SCAF4O95104 1147 aaKnown RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 PRLP01236 227 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 C6orf222P0C671 652 aaPredicted RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 CTGFP29279 349 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 BCAR1P56945 870 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 RBM6P78332 1123 aaKnown RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 TMEM132BQ14DG7 1078 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 DDB1Q16531 1140 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 CATSPEREQ5SY80 951 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 RTN4RL1Q86UN2 441 aaPredicted RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 NME9Q86XW9 330 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 MCF2L2Q86YR7 1114 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 LCORLQ8N3X6 602 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 CISD2Q8N5K1 135 aaKnown RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 RPGRQ92834 1020 aaKnown RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 DYDC2Q96IM9 177 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 DCLRE1CQ96SD1 692 aaKnown RBP3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 TINF2Q9BSI4 451 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 KCNH6Q9H252 994 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 UGGT1Q9NYU2 1555 aa3.62□□□□□ -1.83
DEPDC4-204ENST00000547823 ATP7AQ04656 1500 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 MAP3K1Q13233 1512 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 SAMD9LQ8IVG5 1584 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 E9PSI1 815 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 RNASET2O00584 256 aaKnown RBP3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 CRTAMO95727 393 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 HKR1P10072 659 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 KIR2DL3P43628 341 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 WNT3AP56704 352 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 RAB33AQ14088 237 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 ARHGAP44Q17R89 818 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 SLFN12LQ6IEE8 588 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 GGT6Q6P531 493 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 ARHGEF19Q8IW93 802 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 ZBTB38Q8NAP3 1195 aaPredicted RBP3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 FOXRED1Q96CU9 486 aaPredicted RBP3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 MAML3Q96JK9 1138 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 BOCQ9BWV1 1114 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 TRIM55Q9BYV6 548 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 HAPLN2Q9GZV7 340 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 SERHL2Q9H4I8 314 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 SFMBT1Q9UHJ3 866 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 EIF2B4Q9UI10 523 aaKnown RBP3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 PCDHA9Q9Y5H5 950 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 AFF2P51816 1311 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 TMEM94Q12767 1356 aa3.61□□□□□ -1.83
DEPDC4-204ENST00000547823 NLRP1Q9C000 1473 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 CEP350Q5VT06 3117 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 NWD1Q149M9 1564 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 PREX2Q70Z35 1606 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 ADGBQ8N7X0 1667 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 UBA6A0AVT1 1052 aaPredicted RBP3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 TMEM200CA6NKL6 621 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 DIRC3C9JPN6 131 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 ADCY3O60266 1144 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 ZEB1P37275 1124 aaPredicted RBP3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 CLK3P49761 638 aaKnown RBP3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 KRTAP10-9P60411 292 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 IRF9Q00978 393 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 TM4SF20Q53R12 229 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 PRR16Q569H4 304 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 TTC38Q5R3I4 469 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 FBXO42Q6P3S6 717 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 FAM83AQ86UY5 434 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 ERCC4Q92889 916 aaPredicted RBP3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 OSBPL6Q9BZF3 934 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 R3HDMLQ9H3Y0 253 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 NCDNQ9UBB6 729 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 CFAP65Q6ZU64 1925 aaKnown RBP3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 A2MP01023 1474 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 PZPP20742 1482 aa3.6□□□□□ -1.83
DEPDC4-204ENST00000547823 PRXQ9BXM0 1461 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms