RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HES2Q9Y543 173 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 PCDHB12Q9Y5F1 795 aa20.64■□□□□ 0.89
PRPF40B-206ENST00000547764 A0A087X0B3 334 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 SLC16A4O15374 487 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 CUTAO60888 179 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 LAG3P18627 525 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 GIT2Q14161 759 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 NOMO2Q5JPE7 1267 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 NT5DC1Q5TFE4 455 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 CCDC73Q6ZRK6 1079 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 KCNG4Q8TDN1 519 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 NXF3Q9H4D5 531 aaKnown RBP20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 TMEM134Q9H6X4 195 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 KCNG1Q9UIX4 513 aa20.63■□□□□ 0.89
PRPF40B-206ENST00000547764 PHLPP2Q6ZVD8 1323 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 N4BP3O15049 544 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 KRT18P05783 430 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 AFF1P51825 1210 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 SMTNP53814 917 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 AXDND1Q5T1B0 1012 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 TAS1R3Q7RTX0 852 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 SPPL3Q8TCT6 385 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 APOL6Q9BWW8 343 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 UBN1Q9NPG3 1134 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 TBC1D13Q9NVG8 400 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 LARSQ9P2J5 1176 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 RCOR1Q9UKL0 485 aa20.62■□□□□ 0.89
PRPF40B-206ENST00000547764 MYH11P35749 1972 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 DNAJB1P25685 340 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 PBX3P40426 434 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 STAT6P42226 847 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 ME1P48163 572 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 ZNF131P52739 623 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 CAMK1Q14012 370 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 CSPP1Q1MSJ5 1256 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 EEF1DP3Q658K8 133 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 SHC4Q6S5L8 630 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 KCNT2Q6UVM3 1135 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 THNSL1Q8IYQ7 743 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 HACE1Q8IYU2 909 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 PDILTQ8N807 584 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 TMEM161BQ8NDZ6 487 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 URGCPQ8TCY9 931 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 ZNF558Q96NG5 402 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 LMAN2LQ9H0V9 348 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 PRDM6Q9NQX0 595 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 PCDHA7Q9UN72 937 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 MYO7AQ13402 2215 aa20.61■□□□□ 0.89
PRPF40B-206ENST00000547764 FGF18O76093 207 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 FAM13AO94988 1023 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 AKAP5P24588 427 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 RNASELQ05823 741 aaKnown RBP20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 ATF7IP2Q5U623 682 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 SV2BQ7L1I2 683 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 POF1BQ8WVV4 589 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 GAD1Q99259 594 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 ADPGKQ9BRR6 497 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 NRDE2Q9H7Z3 1164 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 PARVGQ9HBI0 331 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 KANSL3Q9P2N6 904 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 REV3LO60673 3130 aa20.6■□□□□ 0.89
PRPF40B-206ENST00000547764 ARL5CA6NH57 179 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 TBCAO75347 108 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 CSPG5O95196 566 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 POMCP01189 267 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 MAPTP10636 758 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 MLH1P40692 756 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 NCKAP1LP55160 1127 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 BCAR1P56945 870 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 DYMQ7RTS9 669 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 ZNF280BQ86YH2 543 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 ZFP42Q96MM3 310 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 ACO2Q99798 780 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 TARS2Q9BW92 718 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 MRPL4Q9BYD3 311 aaKnown RBP20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 GBP3Q9H0R5 595 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 ZHX3Q9H4I2 956 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 PARP2Q9UGN5 583 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 TNFSF13BQ9Y275 285 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 GIT1Q9Y2X7 761 aa20.59■□□□□ 0.89
PRPF40B-206ENST00000547764 MYMKA6NI61 221 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 INPPL1O15357 1258 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 ZC3H11AO75152 810 aaKnown RBP eCLIP20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 ALDH7A1P49419 539 aaKnown RBP20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 KRT85P78386 507 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 PLCB3Q01970 1234 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 STRN3Q13033 797 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 SKIV2LQ15477 1246 aaKnown RBP20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 TIGD5Q53EQ6 642 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 HAUS6Q7Z4H7 955 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 SLC39A11Q8N1S5 342 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 SLC17A8Q8NDX2 589 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 DDX12PQ92771 950 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 MIOSQ9NXC5 875 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 SPG21Q9NZD8 308 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.89
PRPF40B-206ENST00000547764 NT5C1B-RDH14C9J2C7 533 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 H0YCG3 227 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms