RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PCMTD2Q9NV79 361 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 FOXO6A8MYZ6 492 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ACSL3O95573 720 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ABCB4P21439 1286 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 KCNA3P22001 575 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ATP2B4P23634 1241 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 PPATQ06203 517 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 MPP2Q14168 576 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 AADACL2Q6P093 401 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ARHGEF18Q6ZSZ5 1173 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 LRRC37BQ96QE4 947 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 TBC1D10AQ9BXI6 508 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 IL17RBQ9NRM6 502 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 PCYOX1Q9UHG3 505 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 GGA1Q9UJY5 639 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 COL4A1P02462 1669 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ZNF804BA4D1E1 1349 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 CACNA1SQ13698 1873 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 ENTPD5O75356 428 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 GSTA2P09210 222 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 VCAM1P19320 739 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 NR2F2P24468 414 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 EPHB2P29323 1055 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 POLGP54098 1239 aaPredicted RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 SESN3P58005 492 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 ORC2Q13416 577 aaPredicted RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 CAVIN4Q5BKX8 364 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 CCDC137Q6PK04 289 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 FAM47EQ6ZV65 393 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 TRMT10CQ7L0Y3 403 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 PHC3Q8NDX5 983 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 CTNNBL1Q8WYA6 563 aaPredicted RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 ALG3Q92685 438 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 IFT43Q96FT9 208 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 KCTD10Q9H3F6 313 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 NMRK1Q9NWW6 199 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 NKIRAS1Q9NYS0 192 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 LMCD1Q9NZU5 365 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 GFPT2O94808 682 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 EYA4O95677 639 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 LMNAP02545 664 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 GOLGA8HP0CJ92 632 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 RASSF2P50749 326 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 GPSM2P81274 684 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 STRN3Q13033 797 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 RCN2Q14257 317 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 PDIA5Q14554 519 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 TMEM119Q4V9L6 283 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 PRELID2Q8N945 189 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 MAIP1Q8WWC4 291 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 ART4Q93070 314 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 ZNF333Q96JL9 665 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 PAIP2Q9BPZ3 127 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 KIAA1683Q9H0B3 1180 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 CDC42EP4Q9H3Q1 356 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 CHCHD3Q9NX63 227 aaKnown RBP11.47□□□□□ -0.57
NPAS3-205ENST00000547068 STOML1Q9UBI4 398 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 LRCH1Q9Y2L9 728 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 PCDHA3Q9Y5H8 950 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 NCANO14594 1321 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 A0A1B0GUL6 1792 aa11.47□□□□□ -0.57
NPAS3-205ENST00000547068 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 TMEM253P0C7T8 217 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 HSPA6P17066 643 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 RASA1P20936 1047 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 VHLP40337 213 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 GYG1P46976 350 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 CCDC6Q16204 474 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 HERC4Q5GLZ8 1057 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 FOXB2Q5VYV0 432 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 TTC27Q6P3X3 843 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 ZNF449Q6P9G9 518 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 DPP8Q6V1X1 898 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 GLYCTKQ8IVS8 523 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 CCDC65Q8IXS2 484 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 LRRC8CQ8TDW0 803 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 SCFD1Q8WVM8 642 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 DTNBP1Q96EV8 351 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 CPVLQ9H3G5 476 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 DENND2DQ9H6A0 471 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
NPAS3-205ENST00000547068 CHKBQ9Y259 395 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms