RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 BANF1O75531 89 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 SGPL1O95470 568 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 KRT16P08779 473 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 PCP11498 1178 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 CHKAP35790 457 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 PPP1R2P41236 205 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 ZNF394Q53GI3 561 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 SGO2Q562F6 1265 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 TTC27Q6P3X3 843 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 NUCKS1Q9H1E3 243 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 SLCO1B3Q9NPD5 702 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 RNF14Q9UBS8 474 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 H0YGN5 161 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 ZBTB5O15062 677 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 RASSF9O75901 435 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 BYSLQ13895 437 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 LRCH2Q5VUJ6 765 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 MIGA2Q7L4E1 593 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 SCFD2Q8WU76 684 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 C7orf43Q8WVR3 580 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 TGS1Q96RS0 853 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 P2RX7Q99572 595 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 TRIM6Q9C030 488 aaPredicted RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 KCTD10Q9H3F6 313 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 VPS37BQ9H9H4 285 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 FAM114A2Q9NRY5 505 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 NFS1Q9Y697 457 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 PPATQ06203 517 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 ZNF543Q08ER8 600 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 BIRC3Q13489 604 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 C10orf76Q5T2E6 689 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 INTS8Q75QN2 995 aaKnown RBP15.73■□□□□ 0.11
HOXC11-202ENST00000546378 CPA5Q8WXQ8 436 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 ZNF668Q96K58 619 aaPredicted RBP15.73■□□□□ 0.11
HOXC11-202ENST00000546378 EIF2AK1Q9BQI3 630 aaKnown RBP15.73■□□□□ 0.11
HOXC11-202ENST00000546378 INTS2Q9H0H0 1204 aaKnown RBP15.73■□□□□ 0.11
HOXC11-202ENST00000546378 TMOD2Q9NZR1 351 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 HAO1Q9UJM8 370 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 CD58P19256 250 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
HOXC11-202ENST00000546378 DLGAP5Q15398 846 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 TAF11Q15544 211 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 SLC47A2Q86VL8 602 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 ARHGEF19Q8IW93 802 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 SYCE1Q8N0S2 351 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 GAKO14976 1311 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 CACNA1SQ13698 1873 aa15.73■□□□□ 0.11
HOXC11-202ENST00000546378 SOX5P35711 763 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 CPA2P48052 419 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 ARMC3Q5W041 872 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 RTKN2Q8IZC4 609 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 UBL4BQ8N7F7 174 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 MIEF2Q96C03 454 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 CBWD1Q9BRT8 395 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 YY1AP1Q9H869 796 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 GAS7O60861 476 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 HOXD13P35453 343 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 KRT17Q04695 432 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 LRRC57Q8N9N7 239 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 FAM163AQ96GL9 167 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-202ENST00000546378 RMDN2Q96LZ7 410 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 NUP85Q9BW27 656 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 F5H423 210 aaPredicted RBP15.72■□□□□ 0.11
HOXC11-202ENST00000546378 CCDC6Q16204 474 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 ZCWPW2Q504Y3 356 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 SWT1Q5T5J6 900 aaKnown RBP15.72■□□□□ 0.11
HOXC11-202ENST00000546378 PHLDB3Q6NSJ2 640 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 C16orf86Q6ZW13 317 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 ANKMY2Q8IV38 441 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 SLC16A10Q8TF71 515 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 CHST7Q9NS84 486 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 ECM29Q5VYK3 1845 aa15.72■□□□□ 0.11
HOXC11-202ENST00000546378 ARHGEF35A5YM69 484 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 O00370 1275 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 CBX6O95503 412 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 GNA14O95837 355 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 KCNA3P22001 575 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 PSMC2P35998 433 aaKnown RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 FMO5P49326 533 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 CCNHP51946 323 aaPredicted RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 BIRC2Q13490 618 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 RFFLQ8WZ73 363 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 ERP27Q96DN0 273 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 ACTR5Q9H9F9 607 aaPredicted RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 AIPL1Q9NZN9 384 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 FGRP09769 529 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 ZSCAN5DPP0CG00 497 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 MSH2P43246 934 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 ICA1Q05084 483 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 PSMD2Q13200 908 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 RNF207Q6ZRF8 634 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 LRRN4Q8WUT4 740 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 CCT6BQ92526 530 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 SLC5A5Q92911 643 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 BICD1Q96G01 975 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 CSRNP1Q96S65 589 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 NSRP1Q9H0G5 558 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms