RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 SAMM50Q9Y512 469 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 INSL6Q9Y581 213 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 TRPV2Q9Y5S1 764 aa8.65□□□□□ -1.02
SNHG1-223ENST00000545440 MYO7AQ13402 2215 aa8.65□□□□□ -1.03
SNHG1-223ENST00000545440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 LINC01553A4QN01 128 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 ANKRD33BA6NCL7 494 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 EPOPA6NHQ4 379 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 PSMD10O75832 226 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 C22orf31O95567 290 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 FDPSP14324 419 aaKnown RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 ATP4AP20648 1035 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 IDH3AP50213 366 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 ERVK-21P61565 698 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 PTSQ03393 145 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 INF2Q27J81 1249 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 BTLAQ7Z6A9 289 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 NEK8Q86SG6 692 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 CKAP2LQ8IYA6 745 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 NSUN7Q8NE18 718 aaKnown RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 ARNTL2Q8WYA1 636 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 EDEM1Q92611 657 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 TOP1MTQ969P6 601 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 ZBTB10Q96DT7 871 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 UIMC1Q96RL1 719 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 NAP1L4Q99733 375 aaKnown RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 FTHL17Q9BXU8 183 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 CELF4Q9BZC1 486 aaKnown RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 UNC45AQ9H3U1 944 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 DISC1Q9NRI5 854 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 GABBR1Q9UBS5 961 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 DDX25Q9UHL0 483 aaKnown RBP8.64□□□□□ -1.03
SNHG1-223ENST00000545440 MYH15Q9Y2K3 1946 aa8.64□□□□□ -1.03
SNHG1-223ENST00000545440 VCANP13611 3396 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 TBX3O15119 743 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 MAGEB2O15479 319 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 CHMP2AO43633 222 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 SLC37A4O43826 429 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 KLRC1P26715 233 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 KRT2P35908 639 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 PRKCEQ02156 737 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 TMEM62Q0P6H9 643 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 PAK2Q13177 524 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 LETM2Q2VYF4 491 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 FAM117BQ6P1L5 589 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 RGL4Q8IZJ4 473 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 NECAB1Q8N987 351 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 GPR152Q8TDT2 470 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 SAMD11Q96NU1 681 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 TGS1Q96RS0 853 aaKnown RBP8.63□□□□□ -1.03
SNHG1-223ENST00000545440 YME1L1Q96TA2 773 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
SNHG1-223ENST00000545440 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
SNHG1-223ENST00000545440 RC3H2Q9HBD1 1191 aaKnown RBP8.63□□□□□ -1.03
SNHG1-223ENST00000545440 KCNMB3Q9NPA1 279 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 GJB4Q9NTQ9 266 aa8.63□□□□□ -1.03
SNHG1-223ENST00000545440 ADGRA3Q8IWK6 1321 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 ZNF862O60290 1169 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LPXNO60711 386 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 MMP1P03956 469 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 CD52P31358 61 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 PLCB3Q01970 1234 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 ST3GAL1Q11201 340 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 GRB10Q13322 594 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 PPP2R5CQ13362 524 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 UGCGQ16739 394 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 ODR4Q5SWX8 454 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 PIK3AP1Q6ZUJ8 805 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 MIER3Q7Z3K6 550 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 SPRED2Q7Z698 418 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 KIAA0319LQ8IZA0 1049 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LINC01465Q8N7H1 131 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 GJA10Q969M2 543 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 FAM20AQ96MK3 541 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 MAP7D2Q96T17 732 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
SNHG1-223ENST00000545440 CERS4Q9HA82 394 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LMCD1Q9NZU5 365 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 THEGQ9P2T0 379 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 VAV3Q9UKW4 847 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 POLIQ9UNA4 740 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 LIMCH1Q9UPQ0 1083 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 MTCH2Q9Y6C9 303 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 TTC28Q96AY4 2481 aa8.62□□□□□ -1.03
SNHG1-223ENST00000545440 RBAK-RBAKDNI3L0D1 243 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 RFXAPO00287 272 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 CCNT1O60563 726 aaKnown RBP8.61□□□□□ -1.03
SNHG1-223ENST00000545440 JAK2O60674 1132 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 TMOD1P28289 359 aa8.61□□□□□ -1.03
SNHG1-223ENST00000545440 RBM25P49756 843 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms