RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ATRIPQ8WXE1 791 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 SHDQ96IW2 340 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 BCO2Q9BYV7 579 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 UNC45AQ9H3U1 944 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 FAM217BQ9NTX9 383 aaPredicted RBP10.57□□□□□ -0.72
CHD4-212ENST00000545083 AGPAT5Q9NUQ2 364 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 ZSCAN32Q9NX65 697 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
CHD4-212ENST00000545083 BRPF3Q9ULD4 1205 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
CHD4-212ENST00000545083 WDR81Q562E7 1941 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 MIA3Q5JRA6 1907 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 PATJQ8NI35 1801 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 FAM208BQ5VWN6 2430 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 SLC27A2O14975 620 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 MSH4O15457 936 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 GAS2O43903 313 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 RPL17P18621 184 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 CDC27P30260 824 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 HOXA11P31270 313 aaPredicted RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 CIITAP33076 1130 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 OR1G1P47890 313 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 SLC44A4Q53GD3 710 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 SMG8Q8ND04 991 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 PHKBQ93100 1093 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 NLRP4Q96MN2 994 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 NIFKQ9BYG3 293 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 INO80BQ9C086 356 aaPredicted RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 GLT8D2Q9H1C3 349 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 RNF39Q9H2S5 420 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 MINDY3Q9H8M7 445 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 LTB4R2Q9NPC1 389 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 CHST7Q9NS84 486 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 RBM28Q9NW13 759 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 DPP7Q9UHL4 492 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.56□□□□□ -0.72
CHD4-212ENST00000545083 CNTNAP2Q9UHC6 1331 aa10.56□□□□□ -0.72
CHD4-212ENST00000545083 ZFYVE26Q68DK2 2539 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 MYH15Q9Y2K3 1946 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 SHISA7A6NL88 538 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 MAFO75444 373 aaPredicted RBP10.55□□□□□ -0.72
CHD4-212ENST00000545083 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 FSHRP23945 695 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 TARSP26639 723 aaKnown RBP10.55□□□□□ -0.72
CHD4-212ENST00000545083 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 PRKCQQ04759 706 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 DSC1Q08554 894 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 FZD5Q13467 585 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 RTN1Q16799 776 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 PPM1JQ5JR12 505 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 ELMSAN1Q6PJG2 1045 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 GRASPQ7Z6J2 395 aaPredicted RBP10.55□□□□□ -0.72
CHD4-212ENST00000545083 SECISBP2LQ93073 1101 aaKnown RBP10.55□□□□□ -0.72
CHD4-212ENST00000545083 BORCS6Q96GS4 357 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 TCEANC2Q96MN5 208 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 OSBPL6Q9BZF3 934 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 LSG1Q9H089 658 aaKnown RBP10.55□□□□□ -0.72
CHD4-212ENST00000545083 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 MIOSQ9NXC5 875 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 CDH7Q9ULB5 785 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
CHD4-212ENST00000545083 ESYT2A0FGR8 921 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 GAS7O60861 476 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 NCLP19338 710 aaKnown RBP10.54□□□□□ -0.72
CHD4-212ENST00000545083 DNM2P50570 870 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 SCNN1GP51170 649 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 JAK3P52333 1124 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 SPEM2Q0P670 501 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 LPAL2Q16609 132 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 PFKFB3Q16875 520 aaPredicted RBP10.54□□□□□ -0.72
CHD4-212ENST00000545083 XKR3Q5GH77 459 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 CREB3L3Q68CJ9 461 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 SYNE3Q6ZMZ3 975 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 REXO1Q8N1G1 1221 aaKnown RBP10.54□□□□□ -0.72
CHD4-212ENST00000545083 ITFG1Q8TB96 612 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 SLC5A5Q92911 643 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 FGF13Q92913 245 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 CLDN23Q96B33 292 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 CHAMP1Q96JM3 812 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 ZFP42Q96MM3 310 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 MBOAT7Q96N66 472 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 GAD1Q99259 594 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 KXD1Q9BQD3 176 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
CHD4-212ENST00000545083 PRMT8Q9NR22 394 aaPredicted RBP10.54□□□□□ -0.72
CHD4-212ENST00000545083 HES2Q9Y543 173 aa10.54□□□□□ -0.72
CHD4-212ENST00000545083 ZFP37Q9Y6Q3 630 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms