RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 MEIS1O00470 390 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 SEPT4O43236 478 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 GAS7O60861 476 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 CNMDO75829 334 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 KRT18P05783 430 aaKnown RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 HLA-DOAP06340 250 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 CYBAP13498 195 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 HOXB4P17483 251 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 CYP2C19P33261 490 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 IL2P60568 153 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 GRB14Q14449 540 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 COG2Q14746 738 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 PRRT3Q5FWE3 981 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 SYDE2Q5VT97 1194 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 NAA16Q6N069 864 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 ZC3H7AQ8IWR0 971 aaKnown RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 PPIL6Q8IXY8 311 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 IFNL3Q8IZI9 196 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 SH3RF3Q8TEJ3 882 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 ZNF384Q8TF68 577 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 COG1Q8WTW3 980 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 TGFBRAP1Q8WUH2 860 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 FBLIM1Q8WUP2 373 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 SSH1Q8WYL5 1049 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 FAM122AQ96E09 287 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 ORAI3Q9BRQ5 295 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 TRIM8Q9BZR9 551 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 AKTIPQ9H8T0 292 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 ZBTB21Q9ULJ3 1066 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 PA2G4Q9UQ80 394 aaKnown RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 MYH2Q9UKX2 1941 aa7.27□□□□□ -1.25
CPSF7-222ENST00000544585 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
CPSF7-222ENST00000544585 TRIM43BA6NCK2 446 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 LCE2BO14633 110 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 EIF5BO60841 1220 aaKnown RBP7.26□□□□□ -1.25
CPSF7-222ENST00000544585 GDF11O95390 407 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PRAMEF1O95521 474 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 GSNP06396 782 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 CD3EP07766 207 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 GLB1P16278 677 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PLA2G5P39877 138 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 ID4P47928 161 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 JAG1P78504 1218 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TLE2Q04725 743 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TFCP2Q12800 502 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 NMIQ13287 307 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-222ENST00000544585 BIRC2Q13490 618 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TRIM60Q495X7 471 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 MAP9Q49MG5 647 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 CCDC158Q5M9N0 1113 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 AKNAD1Q5T1N1 836 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 IQSEC1Q6DN90 963 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 DENND5AQ6IQ26 1287 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TATDN1Q6P1N9 297 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 CCDC174Q6PII3 467 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 RSPO2Q6UXX9 243 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-222ENST00000544585 C14orf80Q86SX3 495 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TOP6BLQ8N6T0 577 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 KREMEN2Q8NCW0 462 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 GIMAP7Q8NHV1 300 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TRIM43Q96BQ3 446 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-222ENST00000544585 TOX2Q96NM4 488 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PHF20Q9BVI0 1012 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 KIAA1683Q9H0B3 1180 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 CDH19Q9H159 772 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PDLIM7Q9NR12 457 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 AATFQ9NY61 560 aaKnown RBP eCLIP7.26□□□□□ -1.25
CPSF7-222ENST00000544585 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PALD1Q9ULE6 856 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 ZKSCAN5Q9Y2L8 839 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PTPRFP10586 1907 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 PHIPQ8WWQ0 1821 aa7.26□□□□□ -1.25
CPSF7-222ENST00000544585 GOLGA6CA6NDK9 693 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GOLGA6BA6NDN3 693 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 STXBP3O00186 592 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GNB5O14775 395 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 KIAA0355O15063 1070 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 MEFVO15553 781 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 ALX3O95076 343 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GH2P01242 217 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 THBDP07204 575 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GNAI3P08754 354 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 CLTBP09497 229 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GOLGA6DP0CG33 693 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 NOP2P46087 812 aaKnown RBP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 GPR85P60893 370 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 MRPS5P82675 430 aaKnown RBP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 CYP4F3Q08477 520 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 G3BP1Q13283 466 aaKnown RBP eCLIP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 HLTFQ14527 1009 aaKnown RBP eCLIP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 SKOR2Q2VWA4 1001 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 CERKLQ49MI3 558 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-222ENST00000544585 MAPKAPK5Q8IW41 473 aa7.25□□□□□ -1.25
CPSF7-222ENST00000544585 ABRAQ8N0Z2 381 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms