RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 GUCY2CP25092 1073 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 PBX3P40426 434 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 ERVFC1P60507 584 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 DMP1Q13316 513 aaPredicted RBP25.67■■□□□ 1.7
CHFR-222ENST00000544093 ADAM15Q13444 863 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 SF3A1Q15459 793 aaKnown RBP25.67■■□□□ 1.7
CHFR-222ENST00000544093 TMEM132AQ24JP5 1023 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 PTCRAQ6ISU1 281 aaPredicted RBP25.67■■□□□ 1.7
CHFR-222ENST00000544093 RINT1Q6NUQ1 792 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 APBB1IPQ7Z5R6 666 aaPredicted RBP25.67■■□□□ 1.7
CHFR-222ENST00000544093 CABP7Q86V35 215 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 ADPGKQ9BRR6 497 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 CCDC113Q9H0I3 377 aa25.67■■□□□ 1.7
CHFR-222ENST00000544093 MUC3AQ02505 3323 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 GALTP07902 379 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 SRGAP2BP0DMP2 458 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 NRIP1P48552 1158 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 C1orf186Q6ZWK4 172 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 TMC7Q7Z402 723 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 HSCBQ8IWL3 235 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 SYT2Q8N9I0 419 aaPredicted RBP25.66■■□□□ 1.7
CHFR-222ENST00000544093 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.66■■□□□ 1.7
CHFR-222ENST00000544093 PNMA5Q96PV4 448 aa25.66■■□□□ 1.7
CHFR-222ENST00000544093 ZSCAN16Q9H4T2 348 aaPredicted RBP25.66■■□□□ 1.7
CHFR-222ENST00000544093 RBM19Q9Y4C8 960 aaKnown RBP25.66■■□□□ 1.7
CHFR-222ENST00000544093 TDRD15B5MCY1 1934 aaKnown RBP25.65■■□□□ 1.7
CHFR-222ENST00000544093 ARL5CA6NH57 179 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 H3BQ06 376 aaPredicted RBP25.65■■□□□ 1.7
CHFR-222ENST00000544093 HIP1RO75146 1068 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 NPTXRO95502 500 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 ALDH2P05091 517 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 LTBRP36941 435 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 GIT2Q14161 759 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 SMC1AQ14683 1233 aaKnown RBP25.65■■□□□ 1.7
CHFR-222ENST00000544093 DUSP6Q16828 381 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 TMEM119Q4V9L6 283 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 KCNK18Q7Z418 384 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 ADGRD2Q7Z7M1 963 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 IGSF21Q96ID5 467 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 GBP3Q9H0R5 595 aa25.65■■□□□ 1.7
CHFR-222ENST00000544093 GRXCR2A6NFK2 248 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 K7ERI5 159 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 STX6O43752 255 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 NR1I2O75469 434 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 MLH1P40692 756 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 NDUFV1P49821 464 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 RESTQ13127 1097 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 PLPP4Q5VZY2 271 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 DDX53Q86TM3 631 aaKnown RBP25.64■■□□□ 1.7
CHFR-222ENST00000544093 GAD1Q99259 594 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 RUSC1Q9BVN2 902 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 NXF3Q9H4D5 531 aaKnown RBP25.64■■□□□ 1.7
CHFR-222ENST00000544093 HES2Q9Y543 173 aa25.64■■□□□ 1.7
CHFR-222ENST00000544093 MYH11P35749 1972 aa25.64■■□□□ 1.69
CHFR-222ENST00000544093 CCDC169A6NNP5 214 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 NT5C1B-RDH14C9J2C7 533 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 POMCP01189 267 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 SSBP05455 408 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHFR-222ENST00000544093 PLA2G4BP0C869 781 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 GTF2F1P35269 517 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHFR-222ENST00000544093 PEX3P56589 373 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 DCAF4L1Q3SXM0 396 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 RBM23Q86U06 439 aaKnown RBP25.63■■□□□ 1.69
CHFR-222ENST00000544093 ZNF280BQ86YH2 543 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 RASSF8Q8NHQ8 419 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 PDZD7Q9H5P4 517 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 TMEM134Q9H6X4 195 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 DNAJB4Q9UDY4 337 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 MTMR6Q9Y217 621 aa25.63■■□□□ 1.69
CHFR-222ENST00000544093 TBX10O75333 385 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 NPTX2P47972 431 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 SLC11A1P49279 550 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 SLC12A3P55017 1021 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 DAW1Q8N136 415 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 MRPL43Q8N983 215 aaKnown RBP25.62■■□□□ 1.69
CHFR-222ENST00000544093 KIFC3Q9BVG8 833 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 APOL6Q9BWW8 343 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 RNF39Q9H2S5 420 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 KMT5AQ9NQR1 393 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 CD207Q9UJ71 328 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 FAN1Q9Y2M0 1017 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 PCDHGC5Q9Y5F6 944 aa25.62■■□□□ 1.69
CHFR-222ENST00000544093 MORC2Q9Y6X9 1032 aaPredicted RBP25.62■■□□□ 1.69
CHFR-222ENST00000544093 DDHD2O94830 711 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 HSP90AA1P07900 732 aaKnown RBP25.61■■□□□ 1.69
CHFR-222ENST00000544093 LIG1P18858 919 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 AFF1P51825 1210 aaKnown RBP25.61■■□□□ 1.69
CHFR-222ENST00000544093 SMTNP53814 917 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 SMAD4Q13485 552 aaKnown RBP25.61■■□□□ 1.69
CHFR-222ENST00000544093 CDR2LQ86X02 465 aaPredicted RBP25.61■■□□□ 1.69
CHFR-222ENST00000544093 VPS52Q8N1B4 723 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 RPS6KC1Q96S38 1066 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 NTPCRQ9BSD7 190 aaKnown RBP25.61■■□□□ 1.69
CHFR-222ENST00000544093 FOXD4L1Q9NU39 408 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 ARHGAP28Q9P2N2 729 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 PRKAG3Q9UGI9 489 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 PARP2Q9UGN5 583 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 IRAK3Q9Y616 596 aa25.61■■□□□ 1.69
CHFR-222ENST00000544093 H0YCG3 227 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 LINC01565O15544 149 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms