RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FTLP02792 175 aaPredicted RBP17.88■□□□□ 0.45
KDM2B-216ENST00000543025 PLTPP55058 493 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 BYSLQ13895 437 aaKnown RBP17.88■□□□□ 0.45
KDM2B-216ENST00000543025 CCDC174Q6PII3 467 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 B3GNT9Q6UX72 402 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 CCDC13Q8IYE1 715 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 GPC2Q8N158 579 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 SEC16BQ96JE7 1060 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 EPB41L4BQ9H329 900 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 TMEM206Q9H813 350 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 ACTR5Q9H9F9 607 aaPredicted RBP17.88■□□□□ 0.45
KDM2B-216ENST00000543025 P4HA2O15460 535 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 CAND2O75155 1236 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 ARP10275 920 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 GBP1P32455 592 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 MNAT1P51948 309 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 GPC5P78333 572 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 DLG4P78352 724 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 DENND2CQ68D51 928 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 DAW1Q8N136 415 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 FBXO25Q8TCJ0 367 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 C18orf8Q96DM3 657 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 SNX24Q9Y343 169 aa17.88■□□□□ 0.45
KDM2B-216ENST00000543025 MRPL11Q9Y3B7 192 aaKnown RBP17.88■□□□□ 0.45
KDM2B-216ENST00000543025 MYH11P35749 1972 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PODXLO00592 558 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 VAMP7P51809 220 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 ZDHHC24Q6UX98 284 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 CACNA2D3Q8IZS8 1091 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 TATDN2Q93075 761 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 CENPTQ96BT3 561 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 ZSWIM1Q9BR11 485 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 LARSQ9P2J5 1176 aaKnown RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 COL2A1P02458 1487 aaPredicted RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 LOXHD1Q8IVV2 1947 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 CCDC169A6NNP5 214 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 SHBGP04278 402 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 ZNF280AP59817 542 aaPredicted RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 ALCAMQ13740 583 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 GKAP1Q5VSY0 366 aaPredicted RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 AADACL2Q6P093 401 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 ARHGEF19Q8IW93 802 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 MICALL2Q8IY33 904 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 RPUSD2Q8IZ73 545 aaKnown RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PGM2Q96G03 612 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PRMT6Q96LA8 375 aaPredicted RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 RPS6KC1Q96S38 1066 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PARP2Q9UGN5 583 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PCYOX1Q9UHG3 505 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 HERC5Q9UII4 1024 aaKnown RBP17.87■□□□□ 0.45
KDM2B-216ENST00000543025 PNMA2Q9UL42 364 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
KDM2B-216ENST00000543025 GOLGA6L7A0A1B0GV03 622 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 GGPS1O95749 300 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 CTNNA2P26232 953 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 PTGIRP43119 386 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 SMTNP53814 917 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 ERMARDQ5T6L9 678 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 SEL1L2Q5TEA6 688 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 PADI6Q6TGC4 694 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 CPLX4Q7Z7G2 160 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 TMEM174Q8WUU8 243 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 KRT35Q92764 455 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 PCIF1Q9H4Z3 704 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 RTN2O75298 545 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 DDNO94850 711 aaPredicted RBP17.86■□□□□ 0.45
KDM2B-216ENST00000543025 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 EPC2Q52LR7 807 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 PRELID2Q8N945 189 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 MORC4Q8TE76 937 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 RIT2Q99578 217 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 MYOZ2Q9NPC6 264 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 GRHL1Q9NZI5 618 aa17.86■□□□□ 0.45
KDM2B-216ENST00000543025 CNOT7Q9UIV1 285 aaKnown RBP17.86■□□□□ 0.45
KDM2B-216ENST00000543025 MAPTP10636 758 aaKnown RBP17.85■□□□□ 0.45
KDM2B-216ENST00000543025 MTMR14Q8NCE2 650 aa17.85■□□□□ 0.45
KDM2B-216ENST00000543025 ACER1Q8TDN7 264 aa17.85■□□□□ 0.45
KDM2B-216ENST00000543025 CHURC1Q8WUH1 139 aa17.85■□□□□ 0.45
KDM2B-216ENST00000543025 CHMP6Q96FZ7 201 aa17.85■□□□□ 0.45
KDM2B-216ENST00000543025 XPO6Q96QU8 1125 aaKnown RBP17.85■□□□□ 0.45
KDM2B-216ENST00000543025 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
KDM2B-216ENST00000543025 MTRF1LQ9UGC7 380 aaKnown RBP17.85■□□□□ 0.45
KDM2B-216ENST00000543025 TMEM110-MUSTN1A8MSY1 372 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 EGFRP00533 1210 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 COMTP21964 271 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 GCLMP48507 274 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 MARCKSL1P49006 195 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 CCDC137Q6PK04 289 aaKnown RBP17.84■□□□□ 0.45
KDM2B-216ENST00000543025 MAEAQ7L5Y9 396 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 CROCCP2Q86T23 111 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 C12orf56Q8IXR9 622 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 MDM1Q8TC05 714 aa17.84■□□□□ 0.45
KDM2B-216ENST00000543025 IPO4Q8TEX9 1081 aaKnown RBP17.84■□□□□ 0.45
KDM2B-216ENST00000543025 RNF25Q96BH1 459 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms