RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 STAP1Q9ULZ2 295 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 RNF103-CHMP3A0A140T963 221 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 EIF3HO15372 352 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNC-212ENST00000542877 TDP2O95551 362 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 NFKBIAP25963 317 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 SERPINB4P48594 390 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 NR1I3Q14994 352 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 PPP1R16BQ96T49 567 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 FAM167BQ9BTA0 163 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 BFARQ9NZS9 450 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 SMG5Q9UPR3 1016 aaKnown RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 CPDO75976 1380 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 CCDC195A0A1B0GUA6 201 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 CDC26Q8NHZ8 85 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 ZNF473Q8WTR7 871 aaKnown RBP13.92□□□□□ -0.18
TNC-212ENST00000542877 ISCA1Q9BUE6 129 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 PCSK1NQ9UHG2 260 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 SLC13A4Q9UKG4 626 aa13.92□□□□□ -0.18
TNC-212ENST00000542877 EMSYQ7Z589 1322 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 PSMC5P62195 406 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 DPYDQ12882 1025 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 QRICH1Q2TAL8 776 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 CAPRIN2Q6IMN6 1127 aaKnown RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 FRA10AC1Q70Z53 315 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 CD209Q9NNX6 404 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 M0QYV0 167 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ZFXP17010 805 aaPredicted RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 ITPRIPL1Q6GPH6 555 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 KIAA1841Q6NSI8 718 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 C16orf87Q6PH81 154 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 NEDD1Q8NHV4 660 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 CHP1Q99653 195 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 H3BRJ5 948 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 EYA4O95677 639 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 GPD1LQ8N335 351 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 EIF2AK1Q9BQI3 630 aaKnown RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 IRX2Q9BZI1 471 aaPredicted RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 ARPP19P56211 112 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 LXNQ9BS40 222 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ADCY10Q96PN6 1610 aa13.91□□□□□ -0.18
TNC-212ENST00000542877 ZNF335Q9H4Z2 1342 aaPredicted RBP13.91□□□□□ -0.18
TNC-212ENST00000542877 HUS1O60921 280 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TRIM49P0CI25 452 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TRIM49CP0CI26 452 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 ADA2Q9NZK5 511 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PPP1R12AO14974 1030 aaPredicted RBP13.9□□□□□ -0.18
TNC-212ENST00000542877 FGFR4P22455 802 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 FMR1Q06787 632 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNC-212ENST00000542877 ZBTB41Q5SVQ8 909 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
TNC-212ENST00000542877 AGBL2Q5U5Z8 902 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 RTKN2Q8IZC4 609 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 MASTLQ96GX5 879 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 C7orf25Q9BPX7 421 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TMEM247A6NEH6 219 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 STAT3P40763 770 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 ARSEP51690 589 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 EPHA7Q15375 998 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PRPF38AQ8NAV1 312 aaKnown RBP13.9□□□□□ -0.18
TNC-212ENST00000542877 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 ZNF185O15231 689 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PHF2O75151 1096 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 IFNA8P32881 189 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
TNC-212ENST00000542877 FOXO4P98177 505 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 HIF1AQ16665 826 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PRMT1Q99873 361 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms