RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LIX1LQ8IVB5 337 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ANKRD18AQ8IVF6 992 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 LZTR1Q8N653 840 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 NAXEQ8NCW5 288 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 NLGN2Q8NFZ4 835 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ZSCAN18Q8TBC5 510 aaPredicted RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 PHOSPHO1Q8TCT1 267 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 NSUN6Q8TEA1 469 aaKnown RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 RSAD2Q8WXG1 361 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 KAT5Q92993 513 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 HDAC10Q969S8 669 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 LTV1Q96GA3 475 aaPredicted RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 LIN37Q96GY3 246 aaPredicted RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 NT5C1BQ96P26 610 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 JMJD8Q96S16 334 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ARMT1Q9H993 441 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ZMAT3Q9HA38 289 aaKnown RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ATP6V0A4Q9HBG4 840 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 MYOTQ9UBF9 498 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 TNFRSF10DQ9UBN6 386 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 FBLN5Q9UBX5 448 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 PRSS50Q9UI38 385 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 MAGED2Q9UNF1 606 aaPredicted RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 CDY2AQ9Y6F7 541 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 DYTNA2CJ06 578 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 J3KRW8 73 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 HGSO14964 777 aaPredicted RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 ADAMTS3O15072 1205 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 NCAM2O15394 837 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC16A6O15403 523 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 TADA3O75528 432 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 CSTBP04080 98 aaKnown RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 GLI1P08151 1106 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 TSHRP16473 764 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC6A3Q01959 620 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 DSC2Q02487 901 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 STARD3Q14849 445 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 THEMIS2Q5TEJ8 643 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 FYB2Q5VWT5 728 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SLFN12LQ6IEE8 588 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 HIBCHQ6NVY1 386 aaPredicted RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 PGBD2Q6P3X8 592 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 UNQ6494/PRO21346Q6UXR6 183 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 RSRC2Q7L4I2 434 aaKnown RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SLCO6A1Q86UG4 719 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 TRIM48Q8IWZ4 208 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SYTL1Q8IYJ3 562 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 CCDC33Q8N5R6 958 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 CCDC89Q8N998 374 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF527Q8NB42 609 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 PLBD2Q8NHP8 589 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 BRI3BPQ8WY22 251 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 FATE1Q969F0 183 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 TMEM41AQ96HV5 264 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 KIRREL1Q96J84 757 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 MAP6Q96JE9 813 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 ZC3H10Q96K80 434 aaKnown RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 PPM1MQ96MI6 270 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 PTPN18Q99952 460 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 ADI1Q9BV57 179 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 KIAA1586Q9HCI6 787 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 PNPLA8Q9NP80 782 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 SEMA3GQ9NS98 782 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 ASH2LQ9UBL3 628 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 EIF4G3O43432 1585 aaKnown RBP4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 CFTRP13569 1480 aa4.68□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1B0GVC2 190 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQ45 241 aaPredicted RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A1W2PQY0 241 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 FADS2P1A8MWK0 482 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 GOLGA6L22H0YM25 854 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PHGDHO43175 533 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 FGF18O76093 207 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 ESR1P03372 595 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 NTRK1P04629 796 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 RPLP2P05387 115 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 CELA3BP08861 270 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 CFPP27918 469 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC6A11P48066 632 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 ROM1Q03395 351 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PMS2P11Q13670 270 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 FGL2Q14314 439 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 MUM1L1Q5H9M0 696 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PPP4R3AQ6IN85 833 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 MPZL3Q6UWV2 235 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PDZD4Q76G19 769 aaPredicted RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 KANSL1Q7Z3B3 1105 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 DPF2Q92785 391 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 MTFMTQ96DP5 389 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 FOXB1Q99853 325 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 TTLL2Q9BWV7 592 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 C14orf93Q9H972 538 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 CARS2Q9HA77 564 aaKnown RBP4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF287Q9HBT7 754 aa4.67□□□□□ -1.66
SFSWAP-211ENST00000542813 PDP2Q9P2J9 529 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms