RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 MYH11P35749 1972 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 B4GALT3O60512 393 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 ZSCAN22P10073 491 aaPredicted RBP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 IRS1P35568 1242 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 TJAP1Q5JTD0 557 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 NT5DC1Q5TFE4 455 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 MRPS27Q92552 414 aaKnown RBP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 NXF3Q9H4D5 531 aaKnown RBP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 TMEM134Q9H6X4 195 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 UBE2ZQ9H832 354 aaPredicted RBP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 KANSL3Q9P2N6 904 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
ECHDC2-223ENST00000542552 ZMYM2Q9UBW7 1377 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 SFI1A8K8P3 1242 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 K7ERI5 159 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 FSCN2O14926 492 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 N4BP3O15049 544 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 NCK2O43639 380 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 NPTXRO95502 500 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 ALDH7A1P49419 539 aaKnown RBP17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 ERVFC1P60507 584 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 HYAL1Q12794 435 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 TAS1R3Q7RTX0 852 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 URGCPQ8TCY9 931 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 RAD54LQ92698 747 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 TRIM6Q9C030 488 aaPredicted RBP17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 USP20Q9Y2K6 914 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
ECHDC2-223ENST00000542552 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 DDHD2O94830 711 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 GALTP07902 379 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 BMP1P13497 986 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 PLS3P13797 630 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 DDIT3P35638 169 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 KRT17Q04695 432 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 RNASELQ05823 741 aaKnown RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 PKP1Q13835 747 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 MCM6Q14566 821 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 AAK1Q2M2I8 961 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 PDE12Q6L8Q7 609 aaKnown RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 HACE1Q8IYU2 909 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 GSTCDQ8NEC7 633 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 KCNN1Q92952 543 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 GAD1Q99259 594 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 KMT5AQ9NQR1 393 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 KCNG1Q9UIX4 513 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.32
ECHDC2-223ENST00000542552 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.31
ECHDC2-223ENST00000542552 C5orf42Q9H799 3197 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 NT5C1B-RDH14C9J2C7 533 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 ZC3H11AO75152 810 aaKnown RBP eCLIP17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 F13A1P00488 732 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 POMCP01189 267 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 LIG1P18858 919 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 AKAP5P24588 427 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 LTBRP36941 435 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 MLH1P40692 756 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 SLC11A1P49279 550 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 DSC1Q08554 894 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 ADGRD2Q7Z7M1 963 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 TMEM173Q86WV6 379 aaPredicted RBP17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 IGSF21Q96ID5 467 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 ZFP42Q96MM3 310 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 PTPRHQ9HD43 1115 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 PCDHGC5Q9Y5F6 944 aa17.01■□□□□ 0.31
ECHDC2-223ENST00000542552 NCOR1O75376 2440 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 SLC16A4O15374 487 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 PPP6R2O75170 966 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 CSPG5O95196 566 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms