RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 MAGEA9P43362 315 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 MXD4Q14582 209 aaPredicted RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 ZNF528Q3MIS6 628 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 NOTUMQ6P988 496 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 BLOC1S2Q6QNY1 142 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 Q6ZUG5 572 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 KSR1Q8IVT5 923 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 RNF168Q8IYW5 571 aaPredicted RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 GPR152Q8TDT2 470 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 PRPF31Q8WWY3 499 aaKnown RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 RIN2Q8WYP3 895 aaPredicted RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 SECISBP2LQ93073 1101 aaKnown RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 CEP170P1Q96L14 293 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 FAM20AQ96MK3 541 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 MYADMQ96S97 322 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 SLC26A6Q9BXS9 759 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 BCO2Q9BYV7 579 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 DHX33Q9H6R0 707 aaKnown RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 CHST7Q9NS84 486 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 VPS54Q9P1Q0 977 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 FNIP2Q9P278 1114 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 PCDHA4Q9UN74 947 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 GIT1Q9Y2X7 761 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 PRG3Q9Y2Y8 225 aaPredicted RBP9.99□□□□□ -0.81
UBC-211ENST00000542416 R4GN57 208 aa9.99□□□□□ -0.81
UBC-211ENST00000542416 ZNF292O60281 2723 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 TMEM150BA6NC51 233 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 ADAMTS3O15072 1205 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 SPTLC1O15269 473 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 B4GALT3O60512 393 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 RFPL2O75678 378 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DCNP07585 359 aaKnown RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 PSMA5P28066 241 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 STARD6P59095 220 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 PFKPQ01813 784 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 PRKCQQ04759 706 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 POU5F1BQ06416 359 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DSC1Q08554 894 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 LAMTOR4Q0VGL1 99 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 PPP2R5CQ13362 524 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 TFDP1Q14186 410 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 NTRK3Q16288 839 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 UBXN11Q5T124 520 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 RSPO2Q6UXX9 243 aaPredicted RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 MTSS1LQ765P7 747 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 RNF149Q8NC42 400 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 PJA1Q8NG27 643 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 ETNPPLQ8TBG4 499 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 ZNF707Q96C28 371 aaPredicted RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 MBOAT7Q96N66 472 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 NAP1L4Q99733 375 aaKnown RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 SH2D3AQ9BRG2 576 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 OSBPL6Q9BZF3 934 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 MARCH5Q9NX47 278 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DLL3Q9NYJ7 618 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DLGAP2Q9P1A6 1054 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DDX25Q9UHL0 483 aaKnown RBP9.98□□□□□ -0.81
UBC-211ENST00000542416 FBXO4Q9UKT5 387 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 IPPQ9Y573 584 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 EVPLQ92817 2033 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 DCHS1Q96JQ0 3298 aa9.98□□□□□ -0.81
UBC-211ENST00000542416 LOXHD1Q8IVV2 1947 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 CPLX1O14810 134 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 TBX3O15119 743 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 TGM5O43548 720 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 EDIL3O43854 480 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 ZMYND10O75800 440 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 TDP2O95551 362 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 EFEMP2O95967 443 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBC-211ENST00000542416 GCFC2P16383 781 aaKnown RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 FSHRP23945 695 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 AFF1P51825 1210 aaKnown RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 HTR4Q13639 388 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 PLA2G4FQ68DD2 849 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 PDXDC1Q6P996 788 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 LILRA6Q6PI73 481 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 CPLX2Q6PUV4 134 aaKnown RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 GET4Q7L5D6 327 aaPredicted RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 TAS1R1Q7RTX1 841 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 PALB2Q86YC2 1186 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 C4orf19Q8IY42 314 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 SMG8Q8ND04 991 aaKnown RBP9.97□□□□□ -0.81
UBC-211ENST00000542416 FEZF2Q8TBJ5 459 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 ATRIPQ8WXE1 791 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 KCNB2Q92953 911 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 GJA10Q969M2 543 aa9.97□□□□□ -0.81
UBC-211ENST00000542416 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms