RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 A0A1B0GUA9 196 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 CDC25AP30304 524 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 CA8P35219 290 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 PRPHP41219 470 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 KCNC3Q14003 757 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
CCND1-205ENST00000542367 KRT79Q5XKE5 535 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 TMEM184AQ6ZMB5 413 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 DDX53Q86TM3 631 aaKnown RBP18.17■□□□□ 0.5
CCND1-205ENST00000542367 ZBTB8OSQ8IWT0 167 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 BCL7CQ8WUZ0 217 aaPredicted RBP18.17■□□□□ 0.5
CCND1-205ENST00000542367 GAD1Q99259 594 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 APOL6Q9BWW8 343 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 FZD8Q9H461 694 aa18.17■□□□□ 0.5
CCND1-205ENST00000542367 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
CCND1-205ENST00000542367 C2orf71A6NGG8 1288 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 ARL5CA6NH57 179 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 NPTXRO95502 500 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 LARP1BQ659C4 914 aaKnown RBP18.16■□□□□ 0.5
CCND1-205ENST00000542367 CDCA2Q69YH5 1023 aaPredicted RBP18.16■□□□□ 0.5
CCND1-205ENST00000542367 LLGL2Q6P1M3 1020 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 SLC27A1Q6PCB7 646 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 PRIMPOLQ96LW4 560 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 C1QTNF1Q9BXJ1 281 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 ZBP1Q9H171 429 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 NXF3Q9H4D5 531 aaKnown RBP18.16■□□□□ 0.5
CCND1-205ENST00000542367 PRMT7Q9NVM4 692 aaPredicted RBP18.16■□□□□ 0.5
CCND1-205ENST00000542367 MIOSQ9NXC5 875 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 DNM3Q9UQ16 869 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 FAN1Q9Y2M0 1017 aa18.16■□□□□ 0.5
CCND1-205ENST00000542367 E9PMD0 336 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 PI4K2BG5E9Z4 385 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 NRP1O14786 923 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 MLH1P40692 756 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 NAMPTP43490 491 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 ATP2C1P98194 919 aaPredicted RBP18.15■□□□□ 0.5
CCND1-205ENST00000542367 FAM187BQ17R55 369 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 AUTS2Q8WXX7 1259 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 ZFP42Q96MM3 310 aa18.15■□□□□ 0.5
CCND1-205ENST00000542367 TTLL13PA6NNM8 815 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 INPPL1O15357 1258 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 SRGAP2BP0DMP2 458 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 CTSAP10619 480 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 LIG1P18858 919 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 AKAP5P24588 427 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 SCNN1GP51170 649 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 PPP2R5AQ15172 486 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 MAPK6Q16659 721 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 TMEM132AQ24JP5 1023 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 ANKRD54Q6NXT1 300 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 TMEM87AQ8NBN3 555 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 KIFAP3Q92845 792 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 IFT74Q96LB3 600 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.49
CCND1-205ENST00000542367 MMTAG2Q9BU76 263 aaKnown RBP18.14■□□□□ 0.49
CCND1-205ENST00000542367 VN1R3Q9BXE9 311 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 GIT1Q9Y2X7 761 aa18.14■□□□□ 0.49
CCND1-205ENST00000542367 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
CCND1-205ENST00000542367 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.13■□□□□ 0.49
CCND1-205ENST00000542367 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
CCND1-205ENST00000542367 PRKCBP05771 671 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 OR1G1P47890 313 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 PRPF4BQ13523 1007 aaKnown RBP18.13■□□□□ 0.49
CCND1-205ENST00000542367 ZRSR1Q15695 479 aaKnown RBP18.13■□□□□ 0.49
CCND1-205ENST00000542367 SYCE2Q6PIF2 218 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 COLGALT2Q8IYK4 626 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 CASP10Q92851 521 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 KIFC3Q9BVG8 833 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 APOL5Q9BWW9 433 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 CCDC113Q9H0I3 377 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 S1PR5Q9H228 398 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 KLK14Q9P0G3 267 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 PARP2Q9UGN5 583 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 USP20Q9Y2K6 914 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 HCFC2Q9Y5Z7 792 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 IRAK3Q9Y616 596 aa18.13■□□□□ 0.49
CCND1-205ENST00000542367 VWA3AA6NCI4 1184 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 ACKR2O00590 384 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 N4BP3O15049 544 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 CUL4AQ13619 759 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 GIT2Q14161 759 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 KCNK18Q7Z418 384 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 GSTCDQ8NEC7 633 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 PDZD7Q9H5P4 517 aa18.12■□□□□ 0.49
CCND1-205ENST00000542367 PRG3Q9Y2Y8 225 aaPredicted RBP18.12■□□□□ 0.49
CCND1-205ENST00000542367 EDN1P05305 212 aa18.11■□□□□ 0.49
CCND1-205ENST00000542367 SSBP05455 408 aaKnown RBP eCLIP18.11■□□□□ 0.49
CCND1-205ENST00000542367 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
CCND1-205ENST00000542367 COL9A1P20849 921 aa18.11■□□□□ 0.49
CCND1-205ENST00000542367 EFNA5P52803 228 aa18.11■□□□□ 0.49
CCND1-205ENST00000542367 DSC1Q08554 894 aa18.11■□□□□ 0.49
CCND1-205ENST00000542367 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms