RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 PITRM1Q5JRX3 1037 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 GIMAP6Q6P9H5 292 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 ABHD15Q6UXT9 468 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF627Q7L945 461 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 LYSMD2Q8IV50 215 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 CMIPQ8IY22 773 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 CPT1CQ8TCG5 803 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 EAF2Q96CJ1 260 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-210ENST00000541488 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
PRKDC-210ENST00000541488 TOPORSQ9NS56 1045 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-210ENST00000541488 GOLGA6L6A8MZA4 724 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 NRP1O14786 923 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 MTSS1O43312 755 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 NRP2O60462 931 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 CDK17Q00537 523 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 RABL3Q5HYI8 236 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 DDX46Q7L014 1031 aaKnown RBP5.54□□□□□ -1.52
PRKDC-210ENST00000541488 TAS1R1Q7RTX1 841 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 RNF180Q86T96 592 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 NOP9Q86U38 636 aaKnown RBP5.54□□□□□ -1.52
PRKDC-210ENST00000541488 THNSL2Q86YJ6 484 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 GLB1L2Q8IW92 636 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 TGFBRAP1Q8WUH2 860 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 IL17RAQ96F46 866 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 CPEB1Q9BZB8 566 aaKnown RBP5.54□□□□□ -1.52
PRKDC-210ENST00000541488 GPRC5BQ9NZH0 403 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 HDAC5Q9UQL6 1122 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 NUMBLQ9Y6R0 609 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 ZMYM3Q14202 1370 aa5.54□□□□□ -1.52
PRKDC-210ENST00000541488 A0A1W2PR48 441 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 SCAF4O95104 1147 aaKnown RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 BPIP17213 487 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 FSTL1Q12841 308 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 APBB1IPQ7Z5R6 666 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF276Q8N554 614 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 CLRN3Q8NCR9 226 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 FAM193BQ96PV7 902 aaPredicted RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 TTC1Q99614 292 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 LSM14BQ9BX40 385 aaKnown RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 ENKD1Q9H0I2 346 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 ZNF768Q9H5H4 540 aaKnown RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 IFT22Q9H7X7 185 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 SPON1Q9HCB6 807 aa5.53□□□□□ -1.52
PRKDC-210ENST00000541488 EIF2B4Q9UI10 523 aaKnown RBP5.53□□□□□ -1.52
PRKDC-210ENST00000541488 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 DNAJC6O75061 913 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 APOBEC3AP31941 199 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-210ENST00000541488 GPR15P49685 360 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 GZMKP49863 264 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 UGT8Q16880 541 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 SLC41A1Q8IVJ1 513 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 GLB1L3Q8NCI6 653 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-210ENST00000541488 FBXO18Q8NFZ0 1043 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 MDM1Q8TC05 714 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 SLC25A43Q8WUT9 341 aaPredicted RBP5.52□□□□□ -1.53
PRKDC-210ENST00000541488 DPP7Q9UHL4 492 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 CDY2AQ9Y6F7 541 aa5.52□□□□□ -1.53
PRKDC-210ENST00000541488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 TMEM127O75204 238 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 LTA4HP09960 611 aaKnown RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 NR4A1P22736 598 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 APBA1Q02410 837 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 MRPL49Q13405 166 aaKnown RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 DHCR24Q15392 516 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 CT47A1Q5JQC4 288 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 ANKS6Q68DC2 871 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 FAM83AQ86UY5 434 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 CDC5LQ99459 802 aaKnown RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 TTPALQ9BTX7 342 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 MLST8Q9BVC4 326 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 QRSL1Q9H0R6 528 aaKnown RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 SLKQ9H2G2 1235 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-210ENST00000541488 VTA1Q9NP79 307 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 TRPS1Q9UHF7 1281 aa5.51□□□□□ -1.53
PRKDC-210ENST00000541488 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 ADCY6O43306 1168 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 ITGA10O75578 1167 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 HSP90B1P14625 803 aaKnown RBP5.5□□□□□ -1.53
PRKDC-210ENST00000541488 GYPEP15421 78 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 ADSLP30566 484 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-210ENST00000541488 SCAND1P57086 179 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 TMPRSS15P98073 1019 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
PRKDC-210ENST00000541488 SDE2Q6IQ49 451 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 HAS1Q92839 578 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 TRPM5Q9NZQ8 1165 aa5.5□□□□□ -1.53
PRKDC-210ENST00000541488 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.5□□□□□ -1.53
PRKDC-210ENST00000541488 TMA7Q9Y2S6 64 aaKnown RBP5.5□□□□□ -1.53
PRKDC-210ENST00000541488 GRXCR1A8MXD5 290 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
PRKDC-210ENST00000541488 LEFTY2O00292 366 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms