RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 P3H1Q32P28 736 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 C6orf183Q5T699 404 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 PRPF38BQ5VTL8 546 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 TATDN1Q6P1N9 297 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MAP7D3Q8IWC1 876 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ZNF540Q8NDQ6 660 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 IPMKQ8NFU5 416 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ARMC5Q96C12 935 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ANKRD36BP1Q96IX9 119 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 TMX3Q96JJ7 454 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CEP19Q96LK0 163 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MNTQ99583 582 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 HERPUD2Q9BSE4 406 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CCDC106Q9BWC9 280 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 SLC39A1Q9NY26 324 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MBD2Q9UBB5 411 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 TRIM10Q9UDY6 481 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 AGO2Q9UKV8 859 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 RTCBQ9Y3I0 505 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 PALLDQ8WX93 1383 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CACNB4O00305 520 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 PLOD2O00469 737 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 B4GALT4O60513 344 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ECDO95905 644 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 ATP5BP06576 529 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 HMOX2P30519 316 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SQLEQ14534 574 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 NFE2Q16621 373 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 WSCD2Q2TBF2 565 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 FBXO43Q4G163 708 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 PPP6R3Q5H9R7 873 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 AADACL4Q5VUY2 407 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SNX30Q5VWJ9 437 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ERICH1Q86X53 443 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SUPT20HQ8NEM7 779 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 RUFY2Q8WXA3 655 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 COL26A1Q96A83 441 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ART5Q96L15 291 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 CCDC77Q9BR77 488 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SNRKQ9NRH2 765 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 CCDC87Q9NVE4 849 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 MRPL39Q9NYK5 338 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 GMIPQ9P107 970 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 CRNNQ9UBG3 495 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 EIF2B4Q9UI10 523 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 C15orf41Q9Y2V0 281 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 A6NNZ2 444 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 C9IYK1 514 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 UBXN8O00124 270 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SPTLC1O15269 473 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SEC31AO94979 1220 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 MX2P20592 715 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 PSMC2P35998 433 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 CCT5P48643 541 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ARHGDIBP52566 201 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 VCPP55072 806 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 FOXK1P85037 733 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ITPK1Q13572 414 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SKIDA1Q1XH10 827 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 TUBB8Q3ZCM7 444 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 LRRC24Q50LG9 513 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 RNASEH2BQ5TBB1 312 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 SIGIRRQ6IA17 410 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 HACE1Q8IYU2 909 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 NKAIN3Q8N8D7 197 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 LSMEM1Q8N8F7 131 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 CNNM3Q8NE01 707 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 NSUN7Q8NE18 718 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 SHC3Q92529 594 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 HSPH1Q92598 858 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 SEPT8Q92599 483 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 RNF25Q96BH1 459 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 YME1L1Q96TA2 773 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 AGXT2Q9BYV1 514 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 NAT10Q9H0A0 1025 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 VPS16Q9H269 839 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 IL25Q9H293 177 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ELAC1Q9H777 363 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 C12orf10Q9HB07 376 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 NEK6Q9HC98 313 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 PIH1D3Q9NQM4 214 aaKnown RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 SDHAF3Q9NRP4 125 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 A0A0G2JPF8 293 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 HNRNPCL3B7ZW38 293 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 GOLGA8KD6RF30 607 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 MAPK13O15264 365 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 MTSS1O43312 755 aa6.6□□□□□ -1.35
LMO3-225ENST00000541295 URI1O94763 535 aaPredicted RBP6.6□□□□□ -1.35
LMO3-225ENST00000541295 HEXBP07686 556 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms